Aminobacter aminovorans: AA2016_1607
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Entry
AA2016_1607 CDS
T04343
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aak03021
]
AA2016_1607
Transcription machinery [BR:
aak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA2016_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
DUF134
Motif
Other DBs
NCBI-ProteinID:
AMS40539
LinkDB
All DBs
Position
1657963..1658511
Genome browser
AA seq
182 aa
AA seq
DB search
MAASQGFKGDLLATIPGLRAFAMSLSQNADRADDLVQETLVKAWDKQSSFQPGTNLKAWL
FTILRNEFYSQMRKRGREVQDSDGLLTARLAVHPSQPGRLDLDDFRKALEQLPEDQREAI
ILIGASGFSYEEAAEICGCAVGTIKSRVSRARNRLQEILDISGEADYGPDAIAAQVMGST
VS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcccaaggtttcaagggcgacctgctcgcgaccattcctggcctgcgcgct
ttcgccatgtcgctgtcgcagaacgccgacagggccgacgaccttgtccaggaaacgctg
gtcaaggcgtgggacaagcagtcgagctttcagcccggcaccaacctcaaggcgtggctg
ttcaccatcctgcgcaatgagttctattcgcagatgcgcaagcgtggccgcgaggtgcag
gacagcgacggccttctgaccgcacggctcgccgtgcatccgagccagcccggccgactt
gatctcgacgatttccgcaaggcgctcgagcaactgccggaagaccagcgcgaggcgatc
atcctgatcggcgcgtcgggcttttcctatgaagaggcggcggaaatctgcggctgtgcc
gtcggcaccatcaagagccgggtcagccgcgcccgcaacaggctgcaggagatactggac
atctcgggcgaggccgactacggccccgacgcgatcgcggcccaggtgatgggctcaact
gtcagctga
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