Aureimonas altamirensis: LUX29_07795
Help
Entry
LUX29_07795 CDS
T07762
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aalm
Aureimonas altamirensis
Pathway
aalm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aalm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LUX29_07795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalm03400
]
LUX29_07795
Enzymes [BR:
aalm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LUX29_07795
DNA repair and recombination proteins [BR:
aalm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LUX29_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
UHD47076
LinkDB
All DBs
Position
1605917..1607389
Genome browser
AA seq
490 aa
AA seq
DB search
MFAATLSHPADFDGWREAARIALSHGLTPEAMSFVVEGEGALFGEPLPQEPGSAPPPKVP
RGFIDLARNAACNRDPQRFLLLYSLLWRLQTDRRLLEVASDPEVRRAQDMQKSVLRDSHK
MKAFVRFREVPGDNGAAHYIAWFEPFHHTVELTAPFFTRRFTGMEWTLLTPLRSAHWNGT
ELQFGPPALASDKPDEDAVEALWLTYYASIFNPARLKVKAMQSEMPRKYWHNLPEAQLIR
PLVQGAEEAARRMLETAPTMPGLRHERHAEKAAMTKAAQPVEEAFAGFNRRPEDIEEARE
QASRCRACPLWEPATQTVFGSGPADAPVLFVGEQPGDQEDLAGEPFVGPAGKVFDRALAE
AGLDRSQVYVTNAVKHFKFTPRGKRRIHQKPNAGEVKMCRWWLDIERELIRPKLIVALGA
TAATAVLGKAVTIRDTRSRLIDLDADTRLLVTVHPAYILRLPDRAAQEAEQRAFHADMAL
VRDTVPSIAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccaccctgtcccatccggccgatttcgatggctggcgcgaagcggcccgg
attgcgctgtcgcatgggctgacgccggaggcgatgagctttgttgtggagggcgagggc
gccctgttcggcgagccgctgccgcaggagccgggcagcgcgccgccgcccaaggtaccg
cgcggtttcatcgaccttgcccgaaacgccgcctgcaaccgcgatccgcaacggtttctg
ctgttatatagcctgctctggcggctgcagacggatcgccgtctgctggaggttgcgtcc
gacccggaagtgcggcgcgcgcaggacatgcagaaatcggttctgcgggacagccacaaa
atgaaagccttcgtgcgcttccgcgaggtgccgggcgacaatggcgcggcgcattacatt
gcctggttcgagccgttccatcacacggtggaactgacggcgccgttttttacgcgacgc
tttaccggcatggagtggacgcttctgaccccgcttcgctcggcccactggaatggaacg
gaactgcagttcggcccgccggcgctggccagcgacaagccggacgaggatgccgtcgag
gcattgtggctgacctactatgcctcgatcttcaatccggcccggttgaaggtgaaggcg
atgcaatcggagatgccgcgcaagtactggcataatctgcccgaggcacagttgatacgc
ccgctggtgcagggcgcggaagaggcggcgcgccgcatgctggaaactgcgcccacgatg
ccgggtctgcgccatgagcgccatgcggagaaggcagccatgacgaaggccgcgcagcct
gtggaagaagccttcgcaggcttcaaccggcgtccggaggatatcgaggaagcacgcgag
caggcatcgcgatgccgcgcctgcccgctgtgggagcctgcgacgcagaccgtgttcggc
agcgggccggccgacgcgcccgtccttttcgtcggcgagcaacccggcgaccaggaggat
cttgccggggagcccttcgtcggcccggccggcaaggtgttcgacagggcgctggcggaa
gcggggctggaccggtcgcaggtttacgtcaccaatgcggtcaagcatttcaagtttacg
ccgcgcggcaagcggcgcatccaccagaagcccaatgcgggcgaagtgaagatgtgccgg
tggtggctggatatcgagcgcgagctgatccgtccgaaactgatcgtggcgctgggcgcg
acggcggcaacggcggtgctcggcaaggctgtgaccatccgagatacgcgttcgcggctg
atcgacctggatgccgatacgcggcttctggtgacggtgcaccccgcctacattctgcgg
ctgcccgaccgggctgcacaggaagccgagcaacgggccttccacgccgacatggcgctg
gtgcgcgatacggtaccctccatcgccgcctga
DBGET
integrated database retrieval system
