Alternaria alternata: CC77DRAFT_1061472
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Entry
CC77DRAFT_1061472 CDS
T05291
Name
(RefSeq) polyadenylate binding protein
KO
K13126
polyadenylate-binding protein
Organism
aalt
Alternaria alternata
Pathway
aalt03015
mRNA surveillance pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC77DRAFT_1061472
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_1061472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1061472
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1061472
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CC77DRAFT_1061472
mRNA cycle factors
Stress granule specific factors
CC77DRAFT_1061472
Spliceosome [BR:
aalt03041
]
Complex C
Other components
Complex C specific factors
CC77DRAFT_1061472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
MARF1_RRM1
RRM_occluded
DUF2800
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
29114032
NCBI-ProteinID:
XP_018386333
JGI:
1061472
UniProt:
A0A177DPJ8
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MSDVANPTPVQEGADANGAQVDTNVAAAQAEAPTPTTAAPANNQNSASLYVGELDPSVTE
AMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRI
MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFV
HYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLEVS
DEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYV
GRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSA
KVMRDAMPAEGRSESPSDEKKDEVKEEPKEAEIKEEPKEESKDDSSDDKKDENKSGEKVT
IKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEAT
IQARNQLRMQQQQQQQFGGIPQMFIAPGQQPMMFPAGGRGQMPFPAGMPGQQGGRGAGFP
GGMPGQQGGRGGPNGQQMPPMYMPPGMAPGAFPPAYMNQQYMQLAQAAQQAMGGRGGRGG
PMAPMPGMPQVPMAGVPGMRGGQGFPPQGGRGGPQGARPGQSPMPYPQGGRGGPASAGVD
MGALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTSDEAALRAK
VEEAMSVYDEYVKNKEGEPEKEAPKEEIKEEKA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtcgccaaccctactcccgtccaggagggcgctgacgccaacggcgctcag
gtcgacaccaacgtcgctgctgcccaggccgaagcccccacccccaccaccgccgccccc
gcgaacaaccagaactccgcgtcgctctatgttggcgagctcgacccctccgtcaccgag
gccatgctcttcgagctgttctcctcgattggccaggtcgcgtctatccgtgtctgccgt
gacgccgttacccgtcgctcgctcggttacgcctatgttaactacaacagctctgaagat
ggcgagaaggccctcgaagagttgaactacaccgtcatcaagggcaagccttgccgcatc
atgtggtcccagcgtgaccccgctctgcgcaagactggccagggcaacgtcttcatcaag
aacctggaccacgccattgacaacaaggctctccacgacaccttcgctgctttcggtaac
atcttgagctgcaaggtcgctcaggacgagctcggtaactccaagggctacggattcgtc
cactacgagaccgccgaggccgccaacaacgctatcaagcacgtcaacggcatgttgctc
aacgagaagaaggtcttcgtcggccaccacatccccaagaaggagcgcatgagcaagttc
gaggagatgaaggccaacttcaccaacatctacgtcaagaacatcgacctcgaggtctct
gacgaggacttccgtgagctcttcgagaagcacggtgacatcacctccgcctccatcgca
cgcgatgaccagggcaagagccgcgggttcggcttcgtcaactacatcaagcacgaggct
gcctccgctgccgtggatgctctcaacgacaccgacttccgtggccagaagctctacgtc
ggccgtgctcagaagaagcacgagcgtgaggaggagctccgcaagcagtacgaggccgct
cgtcttgagaagcagtccaagtaccagggtgtcaacctctacatcaagaacctcaacgac
gatgtcgacgacgagaagctgcgcgacatgttcactcctttcggtaccatcacctctgcc
aaggtcatgcgcgacgccatgcctgctgaggggcgctccgagtccccatccgacgagaag
aaggacgaggtcaaggaggagcccaaggaggccgagatcaaggaggagccaaaggaggag
tccaaggatgactcgtctgacgacaagaaggacgagaacaagagcggcgagaaggtcacc
atcaagggtgagaagaagatcctcggtaagagcaagggcttcggtttcgtctgcttcagc
aaccccgacgaggccaccaaggctgtcaccgagatgaaccagaagatgattgagggcaag
cctctctacgtcgctcttgcccagcgcaaggatgtccgcaagaaccagctcgaggccacc
atccaggcccgcaaccagctccgcatgcagcaacagcagcagcagcagttcggcggcatt
ccccagatgttcatcgcacctggtcagcagcctatgatgttccccgctggtggtcgtggc
cagatgcccttccccgctggtatgcctggtcaacagggtggccgtggcgctggcttccct
ggcggtatgcccggccagcaaggtggtcgcggcggacccaacggtcagcagatgcctcct
atgtacatgccccctggcatggctcctggcgctttcccccctgcctacatgaaccagcag
tacatgcagcttgcacaggctgcccagcaggccatgggcggacgtggcggccgtggtggc
cccatggctcctatgcctggtatgccccaagtccccatggctggtgttcccggcatgcgc
ggcggtcagggcttccctcctcaaggtggtcgcggcggtcctcagggcgctcgtcccggt
caatcccccatgccctaccctcagggcggccgtggcggtcccgccagtgccggcgtcgac
atgggtgctttgagcggcgctgctcccggccagcagaagcagatgctcggtgaggctctc
taccccaagatcgctgagatgcagcccgagctcgccggcaagatcaccggtatgcttctc
gagatggacaacagcgagttgatcaaccttacttccgatgaggctgctctccgcgccaag
gttgaggaggccatgagcgtctatgacgaatacgtcaagaacaaagagggtgagcctgag
aaggaagcccccaaggaggagatcaaagaagagaaggcttaa
DBGET
integrated database retrieval system
