Alternaria alternata: CC77DRAFT_1083510
Help
Entry
CC77DRAFT_1083510 CDS
T05291
Name
(RefSeq) DEAD-domain-containing protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1083510
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1083510
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_1083510
Enzymes [BR:
aalt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC77DRAFT_1083510
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CC77DRAFT_1083510
mRNA cycle factors
Common to processing body (P body) and stress granule
CC77DRAFT_1083510
Spliceosome [BR:
aalt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CC77DRAFT_1083510
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CC77DRAFT_1083510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
29114987
NCBI-ProteinID:
XP_018379245
JGI:
1083510
UniProt:
A0A177D2G0
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MADQLDMGRLNINESQHNNQNGFNGERSAYIPPHLRGRPQGGPAPMDGPPPMMNGGGGLG
GSAWGPGGQGPPPQMNGGGGAGGWANAPNFTPRGRDGPPGGGWGGAPRGNFDPNAYGKPG
GGGSGGARGSGDGAWKDGKHVPGPPNQRLERDLFGMPNDPSKQHTGINFEKYDDIPVEAS
GQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKT
GGFLFPILAQAFKNGPSPPPATAQGGYGRQRKAYPTSLVLAPTRELVSQIFDEARKFAYR
SWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYLVLDEADRM
LDMGFEPQIRRIVEGEDMPPTAARQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTS
ENITQKIEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQGFPATSIHG
DRTQREREKALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTG
RAGNTGIATAFFNRGNRGVVRDLLDLLKEANQEVPGFLESIAREGSGFGGGRGGRGGGRG
RGNAATRDVRRMGGGGGFGGGGQWGGAPQGGYGGGYGGAPGGGYAPPAPGGYSGGGGGFG
GGYGNPSGPGGNSWW
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaactcgacatgggtcgtctcaacataaatgagtcccagcacaacaaccag
aacggcttcaacggcgagcgttctgcctacatccctccccaccttcgcggtcgtccccag
ggcggccctgcacccatggacggcccgcccccgatgatgaacggcggcggcggtctcggt
ggcagcgcttggggaccaggaggtcagggtcctccccctcagatgaacggcggcggtggt
gccggtggctgggccaacgcacccaacttcactccccgcggtcgcgacggtcccccaggt
ggtggatggggcggtgcccctcgcggcaactttgaccccaacgcttacggcaagccaggt
ggtggcggctctggaggtgctcgcggatctggtgacggtgcctggaaggacggcaagcac
gtccccggcccgcccaaccagcgtcttgagcgcgacctcttcggcatgcccaacgacccc
tccaagcagcacaccggtatcaacttcgagaagtacgatgacatccccgttgaggcctct
ggtcagggtgttcccgaacccgtcacacgtttcacaaacccgcctctcgacgaccacctg
ctaagcaacatcgagctctccggatacaaggtccccacaccagtccagaagtactccatc
cctatcgtcatgggtggccgtgatctcatggcttgtgcccagaccggttctggaaagact
ggtggtttccttttccccattcttgcccaggctttcaagaacggcccttctcctcctccc
gcaacggctcagggtggctatggacgtcaacgcaaggcttaccccacctcgcttgtcctt
gctcctacccgtgagttggtctcccaaattttcgacgaggcccgcaagttcgcctaccgc
tcgtgggtccgcccttgtgtcgtttacggtggtgccgacattggttcccagcttcgccag
atcgagcgcggctgtgatcttctcgtcgctactcctggtcgtttggtcgacttgatcgag
cgcggccgtatctccctcgccagcatcaagtacctggttcttgacgaggctgaccgcatg
ttggacatgggtttcgagcctcaaattcgccgcattgttgagggcgaggacatgcctcct
accgctgcccgccagacactcatgttctcggccactttcccccgcgacattcagatgctt
gcccgcgacttcttgaaggactacatcttcctttcggtcggtcgtgtcggttctacttct
gagaacattacccagaagattgagtacgtcgaggacgttgacaagcgttctgtcctcctg
gatatccttcacactcatggtgctggtcttaccttgatcttcgttgagaccaagcgtatg
gccgactccttgtcggacttcctcatcaaccaaggcttccccgccacctccattcacggt
gaccgcactcagcgcgagcgtgagaaggctctggagatgttccgaaacggacgttgcccc
atccttgtcgctactgctgtagctgcccgaggtcttgatatcccgaatgtcacccacgtc
gtcaactatgacctgcccaccgatattgacgattacgttcaccgtatcggtcgtactgga
cgtgctggaaacactggtattgccactgctttcttcaaccgcggcaaccgcggagtcgta
cgcgatctccttgatctcttgaaggaggccaaccaggaagtccctggattcctcgagtcc
attgcccgcgaaggctccggcttcggtggaggccgtggtggacgtggaggcggccgtggt
cgtggcaacgctgctacccgtgatgttcgtcgtatgggcggcggtggtggtttcggtggt
ggcggtcagtggggtggtgctcctcaaggcggctacggaggtggttacggcggcgctccc
ggcggcggctacgctcctccagctcctggtggctactctggcggcggtggtggctttggt
ggaggctacggcaacccatccggccctggcggcaactcctggtggtaa
DBGET
integrated database retrieval system
