Alternaria alternata: CC77DRAFT_832535
Help
Entry
CC77DRAFT_832535 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_832535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_832535
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC77DRAFT_832535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
29118922
NCBI-ProteinID:
XP_018387080
JGI:
832535
UniProt:
A0A177DSF3
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MLRPVRPFTVLSFMSQWGGSNQNTLQKNPPSAGPSPGPASPAPPSPSTKQPVTSANFAQS
ATALDTYNNERPPSRATQRDRSDSRASVRPMSMIQTYQPPVMEVSQDTLPELQRIFMFLN
SHSNKLYQEGYFLKFHDTDTRGRPAPDRRWQEYFVQLVGTILSLWDASALDQAGGETEVL
PTFINLTDAAIHMIPSMTLKDGKKLDNILSVSTAASNKFLFHFDSYHALTQWTAGIRLAM
YEHTTLSEAYTGALIAGKGKTLNNIRMILDRQCAKYEDWVRVRFGAGTPWRRCWCVVSPP
DEKEYIKLQKLQKKGSAYERPPVLKGDIKFYETKKVTKKTKAIATVKDAYSCYAIYPQSK
PLIDQSTLVKIEGKITIHSTPESTTEGFVFVMPESRPAISGFEIMLQYLFPVFDTFSLYG
RPKKLIADVLDTRGLMFAMPSDRRYGYLEMWDVVGLINTEGSDKWSERQWRKQLKDLTST
RMMSANQDAESIYSRASRRNTVSRAGFTPRGLRFEDQGSVRSSPSTRQSSPTRKFPDFEV
QKPRRVGTAPAANPFGTPRHQRSVSEQVNGPNNQNTPSRFTRDETPYEDERAPTPPQHRV
LPSSSNGAVQPYDSASDYDESPIKEPQNLPPPPADLSAPPQGYVDLPPTQEHAAYQKPPI
RPNMPMAKPNPAVDSATLQQMADASHGSFPGGIAGAGAAAAWRNQDTIQSRRSGEYNGYG
DQGQSMYLGVNSRPPPSNQNSGNRLSTIPASPYIEHSEFVDSPSGYQPTAPPVPEHSELP
PQPPTHELPYRPHPESGGIPRKPVPGRSPLASEEDDTLSTTSSRLDSLREDVIDPEALDA
FNIQPTLHRQASASSSRYDDDAISTSTPDYASIAEEEEPAPPPRRVPERRTDRPRSGVLT
MIGDPNVKPPSDEDPHGYKSVLDPARAPAAAAVPSIDFGPTYALDFDGKRPGTSGTMTQM
LHDNSASRSKENLATTPNEQNRLSFISGGSTPNTPMHMRSGSNSPQITDSRQVAWQPATA
SPQQPDRQRLDPEDWVMHRATQQQPMMYGHGRSKSHTPPPFGRTHSGDWSQMQPTIGRTH
SGDWSQMQPPIGRTHSGDWSQIRRSPQGSPGPARPPSRPLSRGADTLLDQRPTTLSAREQ
EQVARMTNTPLLDLSQNPKKLQKPPPTGLTGYIDHREKEKAAQKANRHSYTPAMQSEIDR
RTLQNQQRQMMEVQQRQQQMMQQQMQQQQFAMAQAQSTYAPSMMGMPTGGGAPSVMGAPS
MMGTPSMMGTPSVMGMPTGPGTPSGMVGMAYSTPSQMHPMYQQQQQQYFPQTPTPQMNIP
GGWISPAQTPQGQYFPQSSPQGYGNMAQQQQQQNPPTQAYGASFDQAQQAAKFAQQQAQG
QYRR
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccctgttcgccccttcacagttctgtcgttcatgtcacaatggggtggttcc
aaccagaataccttgcagaagaaccctccgtccgctggaccctcgccgggccccgcgtcc
cccgctccgccttcaccctctaccaagcaaccggtaacttcagccaactttgcgcaatcc
gccacggctctggacacgtataacaacgagcgacccccctctcgggcaactcaacgcgac
cgtagcgattcccgagcctcagtgcgccccatgtccatgattcaaacatatcaaccgcca
gtcatggaagtaagccaggatacactgcccgagttgcagcgcatcttcatgttcctgaac
agccactcgaacaagctgtaccaagagggttatttcctcaagttccacgacaccgacact
cgtggccgtcccgcgccagatcgaaggtggcaggagtacttcgtccagctcgtcggcacc
atcctctcactatgggatgcgagtgcgctggaccaggccggtggtgagactgaagtcttg
ccgaccttcatcaacctgacagatgctgcgatccacatgatcccttccatgaccctgaaa
gacggaaagaagctcgacaacatcctcagcgtttcgacagcggctagcaacaagttcctc
ttccacttcgattcctaccacgcgcttacgcaatggaccgccggcatccgcctcgccatg
tacgaacatacaactctctcggaagcatacacgggcgcattgattgctggcaagggcaag
acgctcaacaacattcgcatgattctggatcggcagtgcgcaaagtacgaggactgggtg
cgcgttcgattcggcgcaggcaccccatggcgccgctgctggtgtgttgtctctccacca
gacgagaaggaatacatcaaactgcagaagctacaaaagaagggcagcgcttacgagcgg
ccgccagtactcaagggcgacatcaagttctacgagaccaagaaggttaccaagaaaaca
aaagccattgccactgtcaaggatgcatactcatgttacgccatctacccacagtcgaag
ccgctaatcgatcagtccacgctggtcaagattgagggcaagattacaatacactccacg
ccagaaagcacgacagaagggttcgtctttgtcatgccagaatcgcgtccggctatttca
ggttttgagattatgctccagtacctcttccctgtgtttgatacattttcactgtacgga
cgcccaaagaagttgattgcggatgtgttggatactcgcggtttgatgttcgccatgcct
tctgacagacggtacggttacttggagatgtgggatgttgtgggcttgatcaataccgaa
ggcagtgacaaatggtcagagcgccagtggaggaaacaattgaaggacttgacttcaaca
cgtatgatgtccgcaaaccaggacgctgaatcgatctacagccgcgccagtcgcaggaat
accgtcagccgagcaggcttcacaccacgcggtctacgattcgaagaccaaggttctgtt
cgctctagtccgtccacacgccagtcatcgcctacacgtaaattccccgattttgaggta
caaaagccacgtcgtgttggaacggctcccgcagcgaacccattcggcactccacgccat
cagcgatcggtatcggagcaagtcaatggacccaacaaccagaacacaccgtcgaggttc
acgcgagacgaaacgccctacgaagacgaacgtgcgccgactcctccccagcaccgtgtg
ctccccagctcctcaaatggagcagtccaaccttacgactcggcgtccgactacgatgag
agccctatcaaggagccacagaatctacctccacctcctgcagatttgtccgctcctccg
cagggttatgtcgatcttcctcctactcaggagcacgctgcctatcaaaagccgcccatt
cgtcccaacatgcctatggcgaagccaaatcctgcggtcgattctgctacgctgcagcaa
atggctgacgcgtcacatggatcgtttccaggtggcatagctggtgcaggtgcagcggca
gcctggagaaaccaggacactattcagagtaggcgcagtggcgaatacaacggatatggt
gatcaggggcagtctatgtatcttggtgtaaactcaaggccacctccatcgaaccaaaac
tctggtaatcgcctatctaccattcctgcatcgccctacatcgagcactctgaattcgtc
gattcgccatcaggctaccagccgacagctccgccagttccagaacatagtgagttgccg
ccgcagccccctacccacgagctcccttaccgcccacaccccgaaagtggcggtatacct
cgtaaaccagtaccaggtcggtctcccctagcctcagaagaggatgacaccctctcgacc
actagctcaagactcgatagtttacgagaagacgtaatcgaccccgaagctctcgacgct
ttcaacatccaacctacgctgcaccgtcaggcaagcgcatctagtagccgctacgacgac
gatgcgatatcaacttctacaccagactatgccagcattgctgaagaggaggagcctgcg
cctccaccacgaagggtgcccgaacgacgcaccgatcgccctagaagtggcgtcttgacg
atgatcggagatcccaatgtaaagcctccttcggatgaagatccgcatggctacaaatcc
gtgctggacccagcacgagcacctgcagctgcagctgtgcccagtattgattttggccca
acgtacgctctggactttgacggcaagcgcccaggcaccagcggaaccatgacacagatg
ttgcacgacaacagcgcctcgcgatccaaagagaaccttgcgacaactccgaacgaacag
aatcgactatcgttcatctctggaggaagcacaccaaacacgcctatgcacatgcgtagt
ggttcaaactctccacagataaccgactcacgacaggtcgcgtggcaaccagctacagcc
tcaccacagcagccagatagacagaggctggatcctgaagactgggtgatgcaccgtgcg
actcagcagcagcctatgatgtatggacatgggagaagcaagtcgcatacccctcctccg
ttcggtcgcacgcattccggagactggagtcaaatgcaacctactattggtcgcacacac
tctggagattggagccagatgcagcctcctatcggccgcacacattctggggactggagt
caaatacggcgttcgcctcagggttcgcctggacccgctcgtccacctagtcgcccgttg
agccgtggtgctgacacattgcttgatcaacggcccaccaccttatcagctcgcgagcag
gaacaggttgctcgaatgacgaacactcctcttctggacttgtcgcaaaaccccaagaaa
ctacagaagccgcctccaacaggactgacaggctacatcgatcaccgtgagaaggagaag
gcagctcaaaaggccaatcgccacagctatactccggctatgcaatctgagatcgatagg
cgcacattgcagaaccaacagcgtcaaatgatggaggttcagcaacgccagcagcagatg
atgcaacagcagatgcagcagcagcaattcgcgatggctcaggctcagagcacctatgcg
ccgagtatgatgggaatgccaactggcggtggtgcgcccagcgttatgggcgctcctagc
atgatgggtacccctagtatgatgggcactcctagtgttatgggcatgcctaccgggcct
ggaacgccgtctggaatggtcggcatggcgtactctacgccaagccagatgcaccccatg
taccagcaacagcaacagcagtactttccccagacaccaaccccacagatgaatatccct
ggtggctggatttcaccagcgcagacgccgcagggccagtacttcccacagtcgtcgccg
caaggctatggcaacatggctcagcagcaacagcagcagaacccgcccacacaggcctac
ggcgcaagcttcgaccaggcgcagcaggcagccaaattcgcgcagcaacaggctcaggga
cagtaccgacgttga
DBGET
integrated database retrieval system
