Alternaria alternata: CC77DRAFT_941169
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Entry
CC77DRAFT_941169 CDS
T05291
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
aalt
Alternaria alternata
Pathway
aalt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC77DRAFT_941169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_941169
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_941169
Enzymes [BR:
aalt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
CC77DRAFT_941169
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CC77DRAFT_941169
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CC77DRAFT_941169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
29120370
NCBI-ProteinID:
XP_018383254
JGI:
941169
UniProt:
A0A177DDD9
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MSADPRLRARQEQQPTPTAAATTTAAATAAPPPPPPPPTEPSPTGMDGANDAHAEQNMVP
DDSFKLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYHFNST
TYRAIHDELAQQNTALYTHNGLLNMLGRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGT
ESGVVDVVVTCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIRDNHEEALVGGKAILDLAL
SLNEAAAKEREQHGDSGWQSGGGAARSGFDERVPDILAAWQERWPNMPALWSLAWF
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgacccacgactgcgcgcgaggcaggagcagcagcctacacccactgctgct
gctactactactgctgctgctactgctgcccctccacctccgccgccgccgccgaccgaa
cctagccccacgggtatggacggcgccaatgacgcgcacgcagagcagaacatggtgcct
gatgatagcttcaagctcaagttctgcactgtgtgtgcgagtaaccagaaccgttccatg
gaagctcatctgcagcttgcttcagcgcacctccccacaatcagctttggcactggctct
cttgtccgactccccggtccaaccatcacgcagcctaacgtctatcacttcaacagcacc
acctaccgtgctattcatgatgagctcgctcagcagaatactgccctctacactcacaac
ggcctgctcaacatgcttggtcgcaacttgaacatcaagggctatcctgagcgcttccaa
gactgggtgcccggtaaaccacgtctggatcatgctgaagacaaaggttcgcaggggacg
gaatcgggtgtcgttgatgtcgttgtaacgtgcgaggagcgttgcttcgatgctgtgcta
gaagatctccacaacaagggcggaaagctcaaccgacctgttcatgtcttcaacgttgat
attagggataatcacgaggaagccctcgttggtggtaaagctattctcgacctcgcgctc
agcttgaatgaagctgcggcaaaagagagggagcagcatggcgacagtggatggcaatca
ggtggcggagctgctcgttctggcttcgacgagcgcgttcccgatatacttgcagcctgg
caggagcgatggcccaacatgcctgcgctctggagtttggcttggttctag
DBGET
integrated database retrieval system
