Alternaria alternata: CC77DRAFT_956336
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Entry
CC77DRAFT_956336 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
aalt
Alternaria alternata
Pathway
aalt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CC77DRAFT_956336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalt03032
]
CC77DRAFT_956336
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_956336
Enzymes [BR:
aalt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CC77DRAFT_956336
DNA replication proteins [BR:
aalt03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CC77DRAFT_956336
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CC77DRAFT_956336
Bloom's syndrome complex (BTR)
CC77DRAFT_956336
FA (Fanconi anemia) pathway
CC77DRAFT_956336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
29121101
NCBI-ProteinID:
XP_018389098
JGI:
956336
UniProt:
A0A177DVK6
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MPRNNLSKHLKWLIAEKPFIPPAISPVVYDPDAVPTSSATTPHQNSSFLDEDIEYNEPEP
ASAPPPPPALPVARPAPPHALARIRTIDIHNPPEAEDVASDMARLRNTPASGKPRLIIAG
LPEYASSSNPTSRERREPSDAGGSRSNLQDSSASVRKLTGSTVENTPASQHAAARTKYRE
PIDVDSIDLTGDDAGCSSPIPMRTQKSRKRKSDEYEADLRHTKSPRPVRKAPALSPEPDD
DDDDDDDFPDIDDMVMAPDSPPPPYSAIVDGAGRQSKHIVTAEDDDMEAMLQLEEEERQM
AAAENATSSQARKRKSLSRVPSEIAPARKIGRQTRSPSPRKNNPVTIESTTGKNGVSHTP
GTKRVGHAVLDSEDDEFGALDEMDFDTQSRTKSPIPTMKRVREKTPMAGPGRVASQTQLP
IRSPSKTIRSPSPYQPEEISIPTPAKSQSPKKIAESALVPDKRIPSSSELSKEKRDAIKE
SIETFLSTEGQRLQKHVKAASSAWDSARAAFVAHLSEFGKPDPSEQERMERARSRKDAVE
QLISLKTKQDELTGQRQRVKQKLEDDLNIGQFDAADGETLSRLFKINEDIQIQMFYLLDL
AAIKQQSTPLVKTESKNNRNVVIQSTQASPARPPPKASRDIGSNRIPQTQYTKPSEIGAQ
EVWTPTRRIRFAEEQVAASPLPPLNLGSRAYADDSASGKQKGKSRERSHRVPETPERRRS
PKKPRPAAPQRTPDEFGELDFEEDGSLFGNNMGEPHQPIEINDDDDFGEDFGPDDDDDFL
HEITNIENQAPGGFDWKGERAESRVSTKSREVFRETSTNQVQSKPNQQASPKKQQLNMPA
KNHPGMNFPWSQDLRTALIRRFGLRGFRPGQLEAINTTLSGEHCFVLMPTGGGKSLCYQL
PSVIASGKTRGVTIVVSPLLSLMEDQVTACKQRFGMQAFLINGESTAAQKSMIMDGLRQR
DPQQFIQILYLTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKAL
GDVVRQFPGVPVIALTATATQLVRTDVVANLGIQGCRQFSQSFNRPNLSYEVVPKVKGVI
NSIADLIKERYIGKSGIIYCLSRKSCEQVAQKLSEAGIRAYHYHAGMDSADRSEVQRKWQ
KNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYQYA
DSRILHKMIQEGEGSWEQKQRLTDMLRTVIQYCENKADCRRAQVLGYFSEAFDASKCNST
CDNCRSDATFVTKDLTEYAAMAIKLVSQVHEDNVTMHQCVDAFRGAGSAKIKRSGLEEYG
WGYGKDLERGDNERIFQHLLDAGAFKERSKVNKVGFATNYLHPASTRNDYESKRKQLKLQ
VRSTPQKARAKAPAAKKTKKQQTQFPSTNVDSPVRAPKQKIRSFAYNEEEEDDDDDDFDI
PRHPTRNKTTRGYQTDDFVVDDDDYFAPIRVAKPSKATKGKGVGAPITADQRTAELTDLQ
REVLDDFMNGARKMRTTLQERKGHREAIFTDTVLREMGLDLPMSLDEMKTIPGIRPEMVD
LYGKQFLTLVNNSREFYGDDTPVPRNPQLRNRRPQQSRIIHEIDDDDEEVDDQNHRLVVD
LCSEDEDPMPVAQESEEESFYGDFGEDDDDDDDDGAVHTSHHFSQFQNQDVADFNNRYTQ
LGGGPAPSTKAAKAPAARGGSKAYGSGYKKKGSSRKRASGSFNKSFGGVKKRASKSGGSR
ASGGATTTSRPSGRGGRSGGSGAGTGWSGVMAMPT
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaacaatcttagcaaacatctcaagtggttgatcgccgagaagcctttcatt
ccgcccgcgatttcgcctgttgtatacgatcccgacgcagttccgacgagttcagcgaca
actccacatcagaactcttcatttttggacgaagacatagaatacaatgagcctgaacct
gcctccgcgccaccgcccccaccagcactgccagtcgcacgacccgctccaccccacgct
ctcgctcgaataagaaccatcgacatacacaatccgccagaggcggaagacgtggcctca
gatatggcaagactgagaaacacaccagccagtggaaagcctagactgattatagcgggg
ctgcctgaatatgcttcctcttcgaacccaaccagcagagagcggagggagcctagcgat
gcaggaggttccaggagtaatctgcaggactcctcggcgagtgtgaggaagcttactggt
tccaccgtggaaaacactcccgcctctcaacacgccgctgcgaggacgaagtaccgcgag
ccaattgatgtcgattcaatcgacctcaccggagacgatgcgggctgctcttcgccgatt
ccaatgcgcacgcaaaagagcagaaaacggaagagcgacgagtatgaagcggacctccgt
cacaccaagtcccccaggcctgttcggaaggcgcccgcgctcagtccagagcctgacgac
gacgacgacgacgacgatgacttcccggacatcgatgatatggtcatggctccggatagc
cctcccccaccttactcggccattgtagatggtgcaggtagacaatcaaagcatattgta
acagctgaagatgacgatatggaggccatgttacaactggaagaagaggagcgacagatg
gcagctgcagaaaatgcgacatcctcacaggcccgtaagcgcaagtcactgagccgcgta
ccctctgagattgcacccgctcgaaagatagggaggcaaacacgtagcccttcgccccga
aagaacaatcctgtcacgatcgagagcacaactggaaagaatggagtttcgcacacacct
ggcactaagagagttgggcatgcagttctggactccgaggacgatgaattcggcgcactg
gacgagatggatttcgacacacagtctcggaccaaatcacctatcccaacgatgaagaga
gtgcgtgaaaagacaccaatggctggccctggcagagttgccagtcagacgcagcttcct
atacggtcgccttcgaagaccatacgaagcccaagcccatatcagccggaagagatttcc
atacctaccccagcaaagtctcagtcccccaaaaagattgctgagtctgctcttgtaccc
gacaaacgcataccaagctcttctgaactatccaaagaaaagagagatgctatcaaagaa
tcgattgaaacctttctgagtactgaaggtcaaagattgcaaaagcacgtcaaggctgca
agctcagcatgggacagcgcacgggctgcattcgttgcacatctgtccgaatttggcaag
cctgatcctagcgaacaggaaaggatggaacgcgctcgctcgcgaaaggacgcagtagag
caattgatctcgttgaaaaccaaacaggatgaacttacgggacaacgtcagagggttaag
cagaagctagaggatgacttgaacatcggtcaatttgacgcagcggatggtgaaaccctc
agcagactgttcaagataaatgaggacatacagatccagatgttctacttgttggattta
gcggccatcaagcagcagtcaacgcctcttgtcaaaacagagtcgaaaaacaaccgcaac
gtggtcatacaatcaactcaagcaagtccggcccgaccgcctcccaaggcttccagggat
atagggtcgaatcggattccacagacacagtatactaagccaagtgagattggcgctcag
gaagtgtggacgcctacccgccgtattcgtttcgctgaagagcaagtagccgcgtctccg
ctaccgccactgaatctagggtctcgtgcctatgcagacgacagtgcatcaggaaagcaa
aaaggcaagtcaagagagcgatctcatcgggtacccgagacaccagagcgccgacgatcc
ccaaagaaaccaagaccggcggctccgcagcgtacaccggatgagtttggtgagcttgat
tttgaagaagacggaagcttgttcggcaataacatgggcgagccccaccagcctattgag
ataaacgacgatgatgattttggcgaagattttggacccgacgacgatgacgacttcctt
catgagattaccaatatcgagaaccaggcgccgggtgggtttgattggaaaggcgagcgt
gcagaaagtcgcgtatcaacaaaatctcgcgaggtgttccgcgaaacttctaccaaccaa
gtccaatctaaaccaaaccagcaggcttcaccgaagaagcagcagctaaacatgcctgcc
aaaaaccaccctggaatgaacttcccctggtcgcaggatctcaggaccgcccttattcgt
cgtttcggcctgcgaggatttcgcccaggacagctggaagctatcaacactacactctcg
ggcgaacactgcttcgtgctcatgcctacgggaggtggcaaatcgctctgctaccaactt
ccatcagtgatcgcttcaggcaagacacggggagttactatcgtagtatctccactcttg
agtttgatggaggatcaggtgacggcttgcaaacaacgcttcgggatgcaagcgtttctg
atcaacggagagtctaccgcagcacaaaagagcatgatcatggatgggttacgccagcgg
gatccccaacagttcatacaaatcctctatctaactcctgaaatgcttagcaagaaccag
agaatgatcagtgccttccagcaactgcattctggagggaaccttgcccgtatcgttatc
gatgaagcacattgtgttagtcaatggggccatgatttccgaccagattacaaggcactt
ggagacgttgtccgccaatttcccggagtacctgtcattgccctgactgcaactgcgacc
caactcgttcgtactgatgtagtggccaacctcggcattcagggctgccgtcaattttct
cagagttttaaccgccctaatttgtcctacgaagttgtgccgaaagtcaagggtgtcatc
aacagtattgcggatctgattaaagagaggtacattggcaaatctggaatcatctattgt
ctgtcgcggaagagttgtgagcaagtggcccaaaagttgtccgaggcaggcatccgtgcc
tatcattaccacgcgggaatggattccgctgaccgctccgaggttcaacgcaaatggcaa
aagaatgagtaccacgtcattgtggctaccatcgccttcggcatgggcatcgataaagct
gacgtacgatacgttattcaccactcgctccctaaaagtttagagggctactaccaagaa
actggacgagctgggcgtgacggcaaacgttcagagtgctacttgtattatcagtatgcc
gactcgaggatattacacaaaatgattcaagaaggtgaaggaagttgggagcagaagcag
cgactgactgatatgctacggaccgtcatccagtactgcgagaacaaagccgactgtcga
cgcgctcaagtactcggatactttagtgaagcattcgatgcctctaagtgcaattcaaca
tgcgacaattgtcgttcggatgccacattcgtcacaaaagatcttacagagtatgctgcc
atggccatcaagctcgtaagtcaagtgcacgaggacaatgtaacgatgcatcagtgcgta
gatgctttccgtggcgctggcagtgctaaaattaagcgctcgggattggaagagtacggc
tggggctacggcaaggatctggaacgaggtgataacgaacgcatctttcagcatttgctt
gacgcgggggctttcaaggaaagaagcaaggtgaacaaagttggctttgccaccaactac
ctacaccctgcttcgacacgcaatgactatgaaagcaaacgaaagcaattgaagttacaa
gtacgttctacaccacaaaaggcacgcgcaaaagcacccgcagccaagaaaacgaagaag
cagcagacccagtttccgtcgaccaacgtcgactctcctgtacgcgcgcccaagcaaaag
attcgatcgtttgcttataacgaggaggaggaagacgatgacgatgacgactttgatatt
cctcggcatcctacgcgcaacaagactacgcgtggttaccagactgatgattttgttgtc
gacgacgacgactactttgcgccaatacgtgttgccaagccatcgaaggccacgaaggga
aagggggttggagctccgattactgcagatcaacgaactgcagaacttacagacctacaa
agagaagtcttggacgatttcatgaacggagccaggaagatgagaacgaccttgcaagag
aggaaaggccaccgcgaagccatcttcacagacactgtacttcgtgagatgggtcttgac
ttgcccatgagtctggatgagatgaagaccatccctggtattaggcccgaaatggtggat
ctctatggcaagcaattcttgaccttggtcaacaacagtagggaattctatggagatgac
acaccagtgcctaggaacccgcaacttcgcaaccgtcgacctcaacaatcacggatcatc
cacgagattgacgatgatgacgaggaagttgacgaccagaatcatcggctcgttgtggat
ctgtgtagcgaagacgaagacccgatgcctgttgcacaggagtctgaggaggagtccttc
tacggcgattttggtgaggacgatgatgatgacgacgatgacggcgcggtccacacaagt
catcactttagtcagttccagaaccaagacgttgcagactttaacaaccgatatacacaa
ctcggtggcggcccggctccgtctaccaaagcggccaaggcaccagcagcaagaggtgga
tctaaagcctatggatctgggtataagaagaagggctcgtcccgcaagagggcttctggt
agctttaacaaaagtttcggtggcgtgaagaagcgagcctcgaagagtggcggtagcaga
gcttcaggaggcgcaacaacgaccagcaggccttctggtcgtggtggcagaagtggaggg
tcaggggctggaactggatggtcgggtgtcatggcaatgcccacttag
DBGET
integrated database retrieval system
