Alternaria alternata: CC77DRAFT_968008
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Entry
CC77DRAFT_968008 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aalt
Alternaria alternata
Pathway
aalt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC77DRAFT_968008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_968008
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CC77DRAFT_968008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Rib_recp_KP_reg
Motif
Other DBs
NCBI-GeneID:
29121358
NCBI-ProteinID:
XP_018383130
JGI:
968008
UniProt:
A0A177DFX1
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MADESDDDLYGDETTTQQQKHAKKEEDDSSGDEPMDEESGDEEESDSDIDIIIEKAPAPP
KPAGTQAPPESKAIKIEAPPASSTTPSQQGAPKTVPTTGGTVPQLSAASLSGAAFPAQRT
STIDVNGNPVYPPQGKEILSVDIDADLAEEQKIWRRPGEDQSDYFNYGFDEFTWELYRQR
QVSMANTLQGQKNDMAQMQAMMGGGPMPGMPGMGAGPQGNGGPGGAPPTGPGGGGNAMGP
GGMNEQQMQMMMQDMMAQGMDPSQMDFASFMQMAGQGMGGFGGGPGGQQGGGFQQGHQGG
GRGGRGGRGRGW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaatctgacgacgatctctacggagatgagactaccacgcaacagcaaaag
catgcgaagaaagaggaggacgactctagtggtgacgagcccatggatgaagagtcgggc
gacgaggaagaaagcgactcggatattgatatcattatcgagaaagcgccagcacctccc
aaacccgcaggcacgcaggcacccccagaaagcaaagccataaagatcgaagcaccaccc
gcctcatccactactccctcgcaacagggagcccccaaaactgttcccaccaccggcggc
actgtgccccaactgtccgccgcatccctttcaggcgccgccttccccgcacaacgcacc
tctactatcgatgtgaacggaaatcctgtctaccctcctcaaggcaaagagatcctcagt
gtggacattgatgcagatctagctgaagagcaaaagatctggcgccgaccaggtgaagac
cagtcagattacttcaactacggttttgatgagtttacttgggaattgtaccggcagaga
caagtcagcatggccaacacgctgcaaggtcagaaaaacgacatggcacagatgcaggct
atgatgggcggtggaccgatgccgggtatgcctggtatgggcgctggcccacagggtaac
ggtggaccaggcggtgcgccgccaacagggcctggaggtggcggtaatgctatgggacct
ggaggtatgaatgaacagcagatgcagatgatgatgcaggatatgatggcgcagggaatg
gaccccagccagatggactttgcatccttcatgcagatggctggccagggcatgggtggc
ttcggtggtggacctggcggccagcaaggcggaggcttccaacaaggtcatcaaggcggc
ggaagaggtggacgcggaggtagaggaaggggatggtag
DBGET
integrated database retrieval system