Apteryx mantelli mantelli (North Island brown kiwi): 106486193
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Entry
106486193 CDS
T04298
Symbol
RBBP6
Name
(RefSeq) RB binding protein 6, ubiquitin ligase
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aam04121
]
106486193 (RBBP6)
Enzymes [BR:
aam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106486193 (RBBP6)
Ubiquitin system [BR:
aam04121
]
Ubiquitin ligases (E3)
U-box type E3
106486193 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
106486193
NCBI-ProteinID:
XP_013800186
UniProt:
A0A8B7IMX2
LinkDB
All DBs
Position
Un
AA seq
1790 aa
AA seq
DB search
MHQQSTGGVMIYDGDASSRAGTLERRSVKGYRADDRRPAGGTALTIINHSSSSACKEYTD
DNALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETAFRSRTEPVSGTSKAIDDSS
ASISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGK
PGHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAE
AYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECIRT
ALLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQPPP
PPPPPPPPPLMRQTITRNLQPLLRPTISRQQDPLMIPLAALSSHSAAALSLAPGQSSLAA
ALPVNPSSAAVSDLPPAVSLSLRSEKPDGPFHDADVIPPAALVTASELVKSSSVLSISSL
MEEKGYQVPVLRQPALQSLLGSQGQSIPTTGQPMRASTVRSAGSRPGWEPSSNRGRPHSE
RTQRTQAPTLPASTPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTV
PPPGYPPAPANMSSAWVPTAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLD
EFTNDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSF
SRSHSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPIFRGQS
PTKRTIPQGEGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKF
YKGYAVGAQPRPPVNRENFSPERFGPPGARRENSPYTRGRREDYAGGQSHRNRNIGGNYP
EKPSGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEGARK
PREPVTAEDIKADSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVDKT
KRKAEVAVPPKKDSIIKPTKASQEKVDTDREKSPRTEPPAKKAKEELPKTDSVKTSSSQK
DEKTLGTPRKVHPKVTKDHPETRPAKEEKTKKDHPKEIKSEKPSNKDEKSKKTVEKSKPS
DAKPEKRKRKADEKVDKEHEATSIKASKPETAESKTSPKGKTEPDGEKTERTPEKDKSAF
LTTPAKKIKLNRETGKKIVSGENVPPAKEPAEKPEPSSSKVKQEKVKGKVRRKVTAADGS
SSTLVDYTSTSSTGGSPVRKSEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKW
DKDDFESEEEDIKSTQVPSNVGKPASVVKNVSAKPPNPVKHNEKEAEPLEKTQKTTKEAS
YESSQHDAKGSKSSMSNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERGTEQGNGKN
ISQSSKESRSSEKHDTGRGSTAKDFTPNRDKKSDHDSNRDHSSSKRRDEKSELARRKDSP
SRNRESTSGQKSKPRDERAEPSKKSTGDSKRSSYSPPRDRRQSDHKAAHDSKRSLEEHKP
PDKNSGKEKEKHVSEVKSNKEKEPGGNKPSLRLESPDAKNEKENVTGQNDKSIIKPKPQV
SNSSRLSSDLTRETDEAAFVPDYNESDSESNVSAKDEETAGKNSKEPKEKPVDKVKEETA
APTADQPDASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKDKKKH
KKHKKHKKHKKHAGNESELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTI
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcagagcaccggtggtgtgatgatatacgatggtgatgcatcatcccgcgct
ggcaccctggagcggcgctccgtaaagggctatcgtgccgatgacaggcggcccgctggc
ggcacagccctgaccatcatcaaccattcttccagttcagcctgcaaagaatacacagat
gataatgccctgattcctaagaattcatcagtaattgttagaagaatccctattggagga
gttaaagctacgagcaaaacatatgttatgactcctaaatcgcacaaaatcctagaaact
gctttcagaagtcgaactgaaccagtgagtggaacatcaaaagcaattgatgactcttct
gcatctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttcc
gaagaagataaaataaaagctatgatgtcacagtctggccatgaatatgatccgatcaac
tacatgaagaaacccttgggtccacctccaccatcatatacttgctttcgttgtggaaaa
cctggccattatataaagaactgcccaacaaatggggacaaaaattttgagtctgttccc
aggattaaaaagagcacaggaattcccaggagtttcatgatggaagtgaaagatcccaat
acaaagggtgctatgcttacaaacactggaaaatatgcaataccaaccattgatgcggaa
gcttatgctataggaaagaaggaaaagcctcctttcttaccagaggaaccatcctcctcc
tcagaagaagatgatcctattccggatgagttgttatgtctgatttgcaaagatataatg
aacgatgcggttgttattccctgctgtggaaacagttattgtgacgaatgtatcagaaca
gcactattggaatctgaggaacatacctgtccgacttgtcatcaaacagatgtttctcct
gatgctttaattgccaacaagtttctacgccaggccgtgaacaacttcaaaaatgaaact
gggtacacaaagaggctccgtaagcagattcagcagcaacagcagcagcagccacctcca
ccaccaccaccaccacccccaccccccctaatgagacaaacaataacacgcaacctgcag
cctctactcaggccaacaatttccagacagcaggatccactaatgattccattagctgct
ctgtcttctcattctgctgctgctttgtcattggctcctgggcagtcatctttggcagct
gctctgccagtaaatccgtcttctgccgctgtctctgatctccctccagcagtgtcccta
tctctccgctctgaaaagccagatggaccttttcatgatgctgatgttatacctcctgct
gctcttgtgactgcctctgaacttgttaaatcatcttctgttctgtcaatcagcagtttg
atggaagagaagggctatcaggttcctgtactaagacaaccagcattacaaagtcttcta
ggctcacaaggacaatcaatacccacaactggtcagccaatgagagccagtacagtacgc
tcagcaggcagcaggccaggctgggaaccaagttcaaatcgaggacgcccgcatagtgaa
cgtacacaaaggactcaggccccaacactaccagcatcaacaccagtctttgtgcctgtg
cctccacctcccttgtatcctccacctccccatgcacttcctcttccaccgggggtacca
ccaccacagtttcctcctcagtttccacctggtcagcctccatctgctgggtacactgtc
ccccctccaggatatcccccagctcctgcaaacatgtcatcagcttgggtaccaacagca
gtaccaacggctcattcaaataccatcccaacgacacaagcacctcctttatctagggag
gagttttacagagaacaacggagacttaaagaggaggaaaagaaaaagtccaaacttgat
gagtttacaaatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgt
aggcgttcgttttccaggtccaagtctccctatagtgcttcatcttactctagaagttca
tatacctactccaagtcaagatcaggttcttcccgctcccgctcctactctcggtcgttt
agtcgttcccattcacgttcctactcacgatcacctccgtatccaagaagaggcaaagga
aaaagtcgtaactatcgttctaggtcaaggtcacatggttatcaccgctcgaggtcaaga
tcaccaccgtatagaagataccattcacgatcaaggtctccaatatttagaggccagtct
cccaccaaaaggactataccacaaggggaaggagaaagggagtattttaacaggtacaga
gaagttccaccgtatgatatgaaagcttactatggccgatctgttgattttagagatcca
tttgaaaaagaaagatacagagaatgggaaaggaattatagagaatggtatgagaagttt
tacaagggctatgctgttggagctcaacctcgacctccagtaaatagagagaacttttct
ccagagaggtttggtccacctggagccagacgagagaattcaccatacactcggggacgt
agggaggattatgctggtgggcaaagccatagaaatcgaaatataggtggaaattaccct
gaaaaaccttctggaagagagagccatggcatcaaagatcctacaaaatcaaaagaaaag
gaggtggaaaatccactgggagatggcaagggaaataaacataaaaaacaccgaaagaga
agaaaaggcgatgaaaacgaaggatttcccaatgctgagttgttagaaggtgcaagaaaa
ccaagagaaccagttacagcagaagacatcaaagcagactctctgttcatgctccccagt
agagatgatgctacccctgtgagagatgaacctatggaagcagattctattgcttttaaa
ccagtgtctgaaaaggagaaaaaagagaaagataagccaaaagcaaaagttgacaagaca
aaacggaaagcagaagtagctgttcctcctaagaaagacagtataataaaaccaactaaa
gcttcccaggagaaggtagacactgatcgtgaaaaatctcctcgaacagaacctcctgcg
aaaaaagcgaaggaggagttgccaaagacagacagtgttaaaacatcctcatctcaaaag
gacgagaagactcttggtacaccacggaaagttcatccaaaagtgacaaaagatcaccca
gaaaccagaccagccaaggaagaaaagaccaagaaagatcatccaaaagaaatcaagtca
gagaagccctccaacaaagatgaaaagtcaaaaaaaacagttgaaaaaagcaagccttct
gatgcaaaacctgaaaaaagaaaaagaaaggcagatgaaaaggttgataaagaacacgaa
gccacttccataaaggcctctaaaccagaaactgctgaatcaaaaacgtcaccaaagggg
aagactgagcctgatggtgaaaaaacagagagaactccggaaaaggataaatctgctttt
ctgaccacccctgcaaaaaagattaaacttaaccgagaaaccggcaaaaagattgtgagt
ggagaaaatgtaccacctgcaaaagaacctgctgagaaacctgagccaagcagcagcaaa
gttaaacaagaaaaagtgaaaggaaaagtgagaagaaaagtaacagcagctgatggatct
agttcaactctcgtagattataccagcactagttctactggaggaagccctgttagaaag
tctgaagaaaagccagatacaaaacgaactgttattaagaccatggaagagtataataat
gatataactgcccctgctgaagacgtcattattatgatccaggtccctcaatcaaagtgg
gataaagatgactttgagtccgaagaggaagacattaaatctacccaggtaccctcaaat
gtaggaaaacctgctagtgttgtaaaaaatgtaagtgctaagcccccaaaccctgtgaaa
cacaatgaaaaagaggctgagcctttggaaaaaacacaaaaaactacaaaagaagcaagt
tatgaaagttctcagcatgatgcaaaaggttcaaaaagctcaatgtcaaatgaaaagggg
aaaaccaaagaccgggatcattctttgtcagacaaggacacttctgagaagagaaagagc
agtgttcagccagaaaaagaccactcagaacgtgggactgaacaaggaaatggaaaaaat
atttctcaatcttccaaagagagcagatcttcagagaaacatgatactgggcgtggatcc
actgctaaagactttactcctaaccgagacaaaaaatctgaccatgatagcaacagagat
cattctagttccaagcgcagagatgaaaagagtgagttagcaaggagaaaagactcacct
tctcgaaacagagaatctacatcaggacagaaaagtaaaccaagagacgaacgagcagag
ccgtccaaaaagagcactggagattccaaaaggagcagctacagtcctccacgtgaccga
aggcagtctgatcacaaagctgctcatgattccaagcgttcattggaagaacacaaacct
ccagataaaaattcagggaaagagaaagagaaacatgtatcagaggtaaagagcaataaa
gaaaaagagccaggtggtaataagccatctttgagacttgaatcaccagatgcaaaaaat
gagaaagaaaatgtgactgggcaaaatgataaaagcatcatcaagcctaagcctcaggta
agcaactcctcacggctctcttccgatttaactcgagaaactgatgaggctgcatttgta
ccagactacaatgaaagtgacagtgagagtaatgtatctgcaaaagatgaagaaactgca
ggaaaaaattctaaagaaccaaaagaaaagcctgttgataaagttaaagaggagacagca
gcacctactgctgaccagcctgatgcaagcagaagtcaaagtcaaagcagccctagtgtt
agccgcagtcgtagtcaaagcccttctgagagccagacccgaagccacagcagcagcgcc
agctcaggagagagtcaagacagcaagaagaagaaaaagaaaaaagataaaaagaagcac
aagaaacataaaaaacacaagaagcataagaaacacgctggaaatgaatcggaattggag
aagagccaaaaacacaaacacaagaagaagaaatctaagaagagcaaagataaagagaaa
gatgaccaaaaagttaaatctgtcactatatag
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integrated database retrieval system
