Apteryx mantelli mantelli (North Island brown kiwi): 106500185
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Entry
106500185 CDS
T04298
Symbol
COL5A3
Name
(RefSeq) collagen type V alpha 3 chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106500185 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aam00536
]
106500185 (COL5A3)
Glycosaminoglycan binding proteins [BR:
aam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106500185 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106500185
NCBI-ProteinID:
XP_013817334
UniProt:
A0A8B7K2M6
LinkDB
All DBs
Position
Un
AA seq
1616 aa
AA seq
DB search
MAAPEGRSALGVQSRSWDGPFPEDFSILATVRAQRGGQAFLLSIYDERGVQQLGLEIGRS
PVFLYEDQDGQPAPEQYPVFRKVNLADGRWHRVALAVEGRNVSLLVDCHLLETLPLERGP
QPVVSTEGVTLFGARLLDEEVFEGDVQQLLIVADPTVAHSYCQLYMPGCDQPLLYPLVAP
FPEESGPEATAAPRRKGRKGKGKGKRKGKGKGKKRRNKELLEQQEASVLSTVDGQASTAT
PTRSAEESTLATDAWSPASTTTAAPNRTDPQEDTREEFVLQEAGSTELLPGYEDEDEGDP
ALRGRFGPAEREQPGIRAPQVTLRMTTGKSWGHELGPATGGVKPRPVSPQPSVLQEPSQK
GEKGEPAMLEPGXGLLLLGRPGVSRDGSSSSRPSRARALGLLESPVGALARTAPAQASGM
PWPRVLLPLPFAPGAERRXGPPGPATTLMLPFQFGGDSLKGPSVSFQEAQAQAILQQAKL
AMKGPPGPMGLTGRPGPLGLPGHPGLKGDAGDSGLQGDRGFDGLPGLPGEKGHRGASGID
GAPGPEGSVGIHGEPGPPGQQGNPGPQGLPGPQGPVGLPGEKGSPGKPGIQGVAGADGPP
GHPGREGPAGEKGLQGPAGAAGPVGYPGPRGVKGAFGVRGLKGSKGEKGDQGPLGPRGED
GPEGLKGQTGPMGEPGAAGPAGDKGKLGVPGLPGYPGRQGPKGSAGFQGAVGLAGEKGKR
GDAGHDGAPGAAGEKGPQGPQGPSGFPGTKGPPGPAGKDGLPGHPGQRGEPGPPGPTGVV
GPQGKSGETGPVGERGHPGPPGPPGEQGLPGAAGREGAKGDPGPAGIPGKNGPPGIHGFP
GTRGAPGEMGPPGLKGGEGPPGPPGPTGSPGERGPMGAAGGIGLPGRGGAQGPPGPTGEK
GSPGERGPMGPAGHDGIQGPVGLPGPGGPPGPAGEDGDKGEIGLPGQKGSKGDKGEAGPP
GPTGIQGPLGHPGPAGADGEPGRRGQQGMFGQKGDEGSRGHPGLSGPPGLQGMPGPPGEK
GENGDVGAMGPPGAPGPRGPQGPSGTEGPQGMPGGVGQPGAVGEKGEPGEAGAPGAPGEP
GPPGVKGDMGEKGDAGQSGAAGPPGKKGPPGEDGAKGNLGPIGFPGDPGPPGDPGLPGLD
GVAGEKGDSGDPGLPGPPGASGEPGPPGPPGRRGPVGPTGREGRQGEKGAKGKPGTEGPP
GKMGPVGVQGPPGQPGSEGLRGIPGPAGEQGLLGAPGQVGPPGPLGPVGLPGLKGDPGHK
GDKGHAGLIGLVGPPGEMGEKGDQGLPGIQGPPGPKGDPGLAGPTGPTGPPGPPGLSGPL
GQKGSKGSPGTLGPRGDMGPPGPPGPPGRPAELLEPLPSSRARKRRQATEGAPGEQGAPS
DHEGLEEVYASLSSLRTEVEQLRRPLGTPESPARVCRELQLCHPHLKDGEYWIDPNQGCS
RDAFRVFCNFTAGGETCLFPDKKFEAVRLAAWNREKPGTWYSTFKRGKKFSYVDADGNGV
PVTQLTFLRLLSARAHQNFTLNCQNAAAWYDADASTFARALRFRGANDEELGHGHPATPV
RALRDGCQGRRGQERTVLEVASSRVERLPLTDVAVADFGDTNQKFGFELGPVCFLG
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcccgagggacgatctgcccttggggtgcagagccgatcttgggacggcccc
ttcccggaggacttctccatcctggccacggtgcgagcccagcgaggcggccaggccttt
ctgctctccatctatgatgagcggggcgtgcagcagctgggcctggagattggccgctcg
cccgtcttcctctacgaggaccaggacgggcagccggccccggagcagtaccccgtcttc
cgcaaggtgaacctggccgacggcaggtggcaccgcgtggcgctggctgtggagggcagg
aacgtgtccttgctggtggactgccacctcctcgagacgctgcccctggagcggggcccc
cagcccgtcgtcagcactgagggggttacgctcttcggggctcgcctcctcgatgaggag
gtgttcgagggcgacgtccagcagctgctgattgtggccgaccccacggtggcccactcc
tactgccagctctacatgcctggctgcgaccagcccctgctctacccacttgtggccccc
tttcccgaggagagcggccccgaggccaccgctgccccgcgtcggaagggcaggaagggc
aaggggaaaggcaagcgcaagggaaagggcaagggcaagaagaggaggaacaaggagctg
ctggagcagcaggaggcctcggtgctttccaccgtggatggccaggccagcacggccaca
ccgacccgctccgcggaggagagcaccctcgccacggacgcctggagccccgccagcacc
acgactgctgcccccaaccgcaccgacccccaggaggacaccagggaggaatttgtgctc
caggaggccggcagcacggagctgttgccgggctacgaggacgaggacgagggggacccc
gcgctccgggggcgcttcggcccagccgagcgggagcagccagggatccgggctccccag
gtaacgctgaggatgacgaccgggaaaagctggggccatgagctcggccccgcgacgggt
ggggtgaagccccggcctgtctccccacaacccagcgtcttgcaggagcccagccagaag
ggcgagaagggcgaaccggccatgctggagccgggctntggcctcctgctccttggacgg
cctggggtgagccgggacggctccagcagctcacgccccagcagagccagagctttgggt
ctgttggagtcgcccgtgggcgctctggccagaacggcccctgcccaggcctcggggatg
ccatggccccgtgtcctcttaccgctcccctttgcaccgggggctgagcggcgccnggga
cccccgggccccgcgaccacgctcatgctgccgttccagttcggcggagactccctcaag
ggccccagcgtctccttccaagaagcccaggcccaagcgatcctgcagcaggcgaagctc
gccatgaagggccccccgggccccatggggctgaccggccgcccgggaccactgggtctc
cctggacaccccggcctgaaaggagatgcgggcgactcggggctgcagggtgacagaggc
ttcgacgggcttccggggctgccgggcgagaagggccaccggggcgccagcggcatcgac
ggagcacctggacctgagggcagtgtggggatccacggggagccaggcccgccgggacag
cagggcaaccctggtccgcaggggctgcctggcccccagggtcccgtggggctgccgggg
gagaagggctcgccagggaagccggggatccagggcgtcgctggggccgacgggcccccg
ggtcaccccggccgagaggggccagccggagagaagggtctccagggccctgcgggcgcc
gccggccccgtcggctatccgggaccgcgcggggtgaagggagctttcggcgtgcgcggc
ctgaagggcagcaaaggggagaagggggaccagggcccgctgggcccccggggtgaagac
ggccccgaggggctgaaggggcagacgggccccatgggcgaaccaggcgctgccggccct
gccggcgataagggcaagctgggcgtgccgggcctcccaggataccccggacgccagggc
cccaagggctccgctggcttccagggtgccgtggggctggcgggagagaaaggcaagagg
ggcgacgctggccatgatggggcccctggcgcggcgggggagaagggcccccagggtccg
cagggccccagcggattccccggcaccaaagggccccccggtcccgccgggaaggacggc
ttgccgggacacccagggcagcgcggagagccggggcccccaggccccactggggtggtg
ggaccccagggtaaatcaggcgagaccgggccagtgggcgagagggggcacccaggcccc
cccggccccccgggggagcaggggctgcccggagctgctggccgagaaggagccaagggc
gaccctggcccagctggcatccctggcaagaacggccccccgggcatccatggctttcct
ggcacgcggggtgcgccaggagagatgggtccacccggcctgaagggtggggaaggcccc
cccggtccccctggacccacaggttcccccggtgagcgaggccccatgggggcagctgga
ggcattggactgccgggccgtgggggtgcgcagggcccccccggccccaccggagagaag
ggctccccgggcgagaggggcccaatgggcccagctggacacgacggcatccagggccct
gtggggctgccgggtccaggtggtccccctggccccgctggagaagacggcgacaagggt
gagatcgggctgcccgggcagaagggcagcaaaggcgacaagggtgaggcgggcccgccg
ggaccgacaggaatccaggggcctcttgggcaccccggccccgcgggagcagacggggag
cctgggcgtcgtgggcagcaggggatgtttgggcagaaaggagacgagggctcgcggggg
caccccggcctcagtggccccccgggcctgcagggcatgccaggcccaccaggcgagaag
ggtgagaacggagacgtcggcgccatgggcccccccggcgcgccgggaccacgcgggcca
caaggacccagcggcacagagggtccccagggaatgccaggcggcgtgggacagccaggt
gccgtgggagaaaagggtgagccaggcgaagcaggagcccctggagccccgggggagccc
ggtccgcccggtgtgaaaggggacatgggggagaagggagacgcaggacaatcgggagca
gctgggccccccggcaagaaggggcccccaggagaggatggagccaaaggcaacttgggc
cccatcggcttccctggtgatcccggccctcctggagaccctggcctgccgggtctggac
ggtgtcgctggggagaagggcgacagcggggaccctggcctgccgggtccccctggcgcg
tcaggggagccagggcccccggggccccctggacggagggggccggtggggccaactggg
cgcgagggccgtcagggcgaaaagggtgccaaggggaagcccggcacggagggaccgccc
gggaagatgggccccgtgggggtgcaggggcctccagggcagcccggctccgaaggcctc
cgcgggatccctggtccagctggtgagcaaggtctgctgggagccccaggacaagtggga
ccacctggccccctgggccctgtgggcttgcctggcctcaaaggagatcctggccacaag
ggagacaagggccatgctggactgatcgggctcgttggacctccaggagagatgggggag
aaaggagaccaggggctgccaggcatccagggccccccaggacccaagggagaccctggt
ttggctggacccacaggtcccaccggccccccagggcctcccgggctctcgggacctttg
ggtcagaagggctccaaaggctcaccgggcacgctgggccccagaggtgacatgggcccc
cctgggcccccagggccaccgggccgcccagctgagctgctcgagccacttccctcgagc
agggccaggaagcgccggcaggccacggaaggggctcccggggagcagggagccccctca
gaccacgaggggctggaggaagtgtatgcttcgctcagctccctgcgcaccgaggtcgag
cagctgagacggcccctgggcacccccgagagtcccgctcgtgtctgcagggagctgcag
ctctgccacccccacctcaaggatggcgagtactggattgaccccaaccagggctgttcc
cgagatgccttccgggttttctgtaatttcacggctggcggcgagacctgtctcttccct
gataagaagtttgaggctgtccgactcgctgcctggaacagggagaagccgggaacatgg
tacagcaccttcaagaggggcaaaaagttctcctatgtggacgcggatgggaacggggtg
cctgtgacccagctcaccttcctgcgtctcctgagcgccagagcccaccagaacttcacg
ctgaactgccagaacgcagccgcctggtacgacgccgacgccagcaccttcgcccgcgcc
ctgcgcttccgtggggccaacgacgaggagctggggcacggccaccctgccacccccgtc
cgggccctccgtgacggctgccagggacgccggggccaagagcggacggtgctggaggtg
gcctcgtcccgcgtcgaacggctgcccctgacggacgtggccgtggccgacttcggagac
accaaccagaagtttggcttcgagctgggccccgtgtgcttcctgggctga
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