Arvicola amphibius (Eurasian water vole): 119806337
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Entry
119806337 CDS
T08327
Symbol
Trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aamp01001
]
119806337 (Trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119806337 (Trim24)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119806337 (Trim24)
Protein kinases [BR:
aamp01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119806337 (Trim24)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119806337 (Trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
119806337
NCBI-ProteinID:
XP_038173908
LinkDB
All DBs
Position
2:184888915..185003644
Genome browser
AA seq
1049 aa
AA seq
DB search
MEVAVEKAAAAAAPAGGPAVAAPSGENEAESRQGPDSENDGEAARLNLLDTCAVCHQNIQ
SRAPKLLPCLHSFCQRCLPAPQRYLMLTAPALGSAETPPPAPVPAPAPGSPAGGPSPFAT
QVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECV
EWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDK
LTCRDCQLLEHKEHRYQFIEEAFQNQKGIIDTLITKLMEKTKYIKYTGNQIQNRIIEVNQ
NQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVM
HFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINL
GSLVIEDKESQPQIPKQNPVVEQSSQPPGGLPSNQLSKFPTQISLAQLRLQHMQQQVMAQ
RQQVQRRPAPVGLPNPRMQGPIQQPSISHQHPPPRLINFQNHSPKPNGPVLPPYPQQLRY
PPNQNIPRQTIKPNPLQMAFLAQQAIKQWQISSGQAPPTTASSSSSTPSSPTITSAAGYD
GKAYSSPMIDLSAPVGGTYNLPSLPDIDCSSTIMLDNIARKDTSVDHGQPRPPSNRTVQS
PNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI
RIKQENSGPPENYDFPVVIVKQESDEESRTQNTNYPRSILTSLLLNNNQSSASEEAVLRS
DAPDSTGDQPGLNQESSSNGKPEWLDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLC
CEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPSHSDKRKTEGLTKLT
PIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTK
PEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKLEFRNEAED
SKFSDDSDDDFVQPRKKRLKSAEDRQLLK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaggcggcggcggcggcggctccggccgggggccccgcagtg
gcggcaccgagcggggagaacgaggccgagagccggcagggcccggactccgagaacgac
ggcgaggcagcccggctcaacctgttggacacttgcgccgtgtgccaccagaacatccag
agccgagcgcccaagctgttgccctgcctgcactcgttctgccagcgctgcctgcccgcg
ccccagcgctacctcatgctgacggcgcccgcgctgggctcggcagagacccctccaccc
gcgcccgtccccgcccccgccccgggctccccggccggtggtccttcgcccttcgctacc
caagttggagtcattcgatgcccagtttgcagtcaagaatgtgctgagagacatattata
gacaacttttttgtgaaggacaccactgaggttcccagtagtacagtagaaaagtctaat
caggtatgtacaagctgtgaagataatgcagaagctaatggattttgtgtagagtgtgtc
gaatggctctgcaaaacatgtattagagctcaccagagagtgaagttcacaaaagaccac
acagtcaggcagaaagaagaagtatctccagaggcagttggtgtgaccagtcagcgacca
gtgttctgtccattccataaaaaggagcagctgaagctttactgtgaaacatgtgacaaa
ctgacatgtcgggactgccagctgctggaacacaaagagcatagatatcaatttatagaa
gaagcttttcaaaatcaaaaaggtatcatagatacactaatcaccaaactgatggagaaa
acaaaatatataaagtatacaggaaatcagatccaaaacagaataattgaagtaaatcaa
aaccaaaagcaggtggaacaggatattaaagttgccatctttacattgatggtggagatc
aacaagaaagggaaagcccttctgcaccaacttgagagtcttgcaaaagaccatagaatg
aaacttatgcagcaacagcaggaagtggctggactttccaagcagctggagcacgtcatg
catttttctaagtgggccgtttccagtggcagcagcacagcactgctttacagcaagcgg
ctgattacatatcggttacggcaccttcttcgtgcaaggtgtgatgcttctcctgtgacc
aacaacaccatccagtttcactgtgatcctagtttctgggctcaaaacattattaacctg
ggttctttagtaatcgaggataaagagagccagccacaaatacctaagcagaatcctgtc
gtggaacagagttcacagccaccaggtggtttaccttccaaccagttatccaagttccca
acacagatcagcctagctcagttacgactccagcatatgcagcaacaggtaatggctcag
aggcaacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatgcaaggg
cccatccagcaaccttccatctctcatcagcatccgccaccacgtttaataaactttcag
aatcacagccctaaacccaatggaccagttcttcctccttatcctcaacagctgagatac
ccaccaaaccagaatataccacgacagacaataaaacccaaccccttgcagatggcgttt
ttggctcaacaggccataaaacagtggcagattagcagtggacaagctcctcccacaact
gccagcagctcctcctctactccttccagtcccacaatcacaagtgcagcagggtacgat
ggaaaagcttatagttcacccatgattgatctgagtgcaccagtgggagggacttacaat
cttccatctcttccagatattgattgttcaagtactatcatgttggacaatattgcaagg
aaagatacaagtgtagatcatggccagccaagacctccgtcaaacagaacggtgcagtca
ccaaattcatcagtgccatctccaggccttgcaggacctgttactatgactagtgtccat
cccccaatacgttcacctagtgcctccagcgttgggagccgaggaagctctggctcttcc
agcaaaccagcaggagctgattccacacacaaagtcccagtagtcatgttggaaccaatc
cgaataaaacaagaaaacagcggaccacctgaaaattatgattttcctgttgttatagta
aaacaagaatcagatgaagaatctagaactcaaaatactaactatccaagaagcatactt
acttcccttctcttaaacaataatcagagctctgcttctgaggaagctgtgttaagatct
gatgctcctgatagcacaggagatcaacccggacttaatcaggaaagttcctcaaatgga
aagcctgagtggctggatgcgtcccagaagtcacctgtgcatgtcggagagacaaggaag
gaagatgaccccaatgaagactggtgtgcagtttgtcaaaatggaggggaactcctttgc
tgtgaaaagtgtcctaaagtattccatcttacttgtcacgtgcccacattgacaaatttc
ccaagtggagagtggatttgtactttctgccgagatttatctaagccagaagttgaatat
gattgtgatgctcccagtcactcagataaaaggaaaactgaaggccttactaaattaaca
ccaatagataaaaggaaatgtgaacgcctgcttctgtttctttactgccatgaaatgagc
ctggctttccaagaccctgttcctctaactgtgcctgattattataaaataattaaaaac
ccaatggacttgtcaaccatcaagaaaagacttcaggaagattattgcatgtatacaaag
cccgaagattttgtagctgattttagattgatctttcagaactgtgctgaattcaatgag
cctgattcagaagtagccaatgctggtatcaaacttgaaagctattttgaagaactttta
aagaatctgtatccagaaaaaaggtttccaaaactagaattccggaatgaagcggaagat
agtaagttcagtgacgactccgatgatgactttgtccagccccggaagaagcgcctcaag
agcgcagaggaccgccagctgctaaagtga
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