Arvicola amphibius (Eurasian water vole): 119806492
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Entry
119806492 CDS
T08327
Symbol
Erc1
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
119806492 (Erc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119806492 (Erc1)
Membrane trafficking [BR:
aamp04131
]
Exocytosis
Others
Others
119806492 (Erc1)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119806492 (Erc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Crescentin
GAS
AAA_13
ADIP
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
119806492
NCBI-ProteinID:
XP_038174155
LinkDB
All DBs
Position
2:28119459..28447345
Genome browser
AA seq
1120 aa
AA seq
DB search
MYGSARSVGKVEPSSQSPGRSPRLPRSPRLGHRRTNSTGGNSGNSVGGGSGKTLSMENIQ
SLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGVRMTAMGSSPNIASSGVAS
DTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLS
SSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQR
DLNQLFQQDSSSRTGEPCVAELTEENFQRLHTEHERQAKELFLLRKTLEEMELRIETQKQ
TLSARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNML
REEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE
EEVKQMEVYRSHSKFMKNKVEQLKEELSSKEAQGEELKKRAAGLQSEIGQVKQELSRKDT
ELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNK
KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKER
VKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEK
VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA
HEATLEARASPEMNDRIQQLEREIARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA
ELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKD
GRIEELEEALRESVQITAEREMVLAQEESARTSAEKQVEELLMAMEKVKQELESMKAKLS
STQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQE
EVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKPSRSNQTNHKPSPDQIIQPLLEL
DQNRSKLKLYIGHLTALCHDRDPLILRGLTPPASYNADDDQAAWESELQKMTQEQLQSEL
EKVEGDNAELQEFANTILQQIADHCPDILEQVVSALEESS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaagtgctcgatcagtagggaaagtggaaccaagcagccagagtcctgggcga
tcacctcggcttccacggtcccctcgcttaggtcatcggcgaacaaatagtacaggaggg
aattctggaaacagtgttggaggtggcagtgggaaaaccctttcaatggagaatatacag
tccttaaatgctgcctatgctacatctggccccatgtacctaagtgaccatgaaaatgtg
ggttcagaaacacctaaaagcaccatgacacttggtcgttctgggggacgcctgccttac
ggtgttaggatgactgctatgggcagtagccccaatatagcaagcagtggggttgctagt
gataccatagcatttggagaacatcacctccctcctgttagtatggcatccactgtacct
cactctcttcgtcaggcaagagataacaccatcatggatctgcagacacagctaaaggaa
gtactaagagaaaacgatcttttgaggaaggatgtggaagtaaaggaaagcaaactaagt
tcttcgatgaatagcatcaaaaccttctggagcccagagctgaagaaagagcgagccttg
agaaaagatgaagcttccaaaatcaccatttggaaggaacagtaccgagttgtgcaggaa
gaaaatcagcacatgcagatgacgatccaggctctccaggatgagttgcggattcagagg
gacttgaatcagctgtttcagcaagatagtagcagtaggactggagagccgtgtgtggcg
gagctgacagaggagaacttccagaggctgcacaccgagcacgagcggcaagccaaagag
ctgtttcttctgcggaagaccctggaagagatggagctgcggattgaaactcaaaagcaa
accctaagtgctcgggatgagtccattaagaagcttctggagatgttacagagcaaaggg
ctttctgccaaagctacagaagaagaccatgaaagaacaagacggctggcagaggcagag
atgcacgtccaccacctagaaagtcttttggagcaaaaggaaaaagagaataatatgttg
agagaggagatgcaccggagatttgagaatgcccccgattctgccaaaacaaaagccttg
caaaccgtcattgagatgaaggattcaaaaatttcttccatggagcgtggactccgagac
ctggaagaggaaattcagatgctgaaatcaaatggggctttgagcacggaagagcgagag
gaagaagtgaagcagatggaggtgtacaggagccactccaaattcatgaagaataaggta
gagcaactgaaggaggaactaagttcgaaagaggctcaaggggaggagctgaaaaagaga
gcggctggtcttcagtctgagattggccaggtgaaacaagagttgtccagaaaggacact
gaactgctagccttacaaaccaagctagagactctcacgaaccagttctcagatagtaag
caacacatcgaggtgctgaaggagtccctcactgctaaagaacagagggctgccatcctg
cagactgaggtggatgctcttcgattacgtttggaagaaaaggagactatgctaaataaa
aaaacgaaacaaattcaagatatggctgaggagaagggtacacaagctggagagatacat
gacctcaaggacatgctggatgtgaaggaacggaaggtcaatgttcttcagaaaaagatt
gaaaatctccaggaacaactgagagataaagaaaagcagatgagcagcttgaaagagcga
gtcaagtctctgcaggcggacaccaccaacacagacacagcgctaacaaccttggaggag
gctcttgcagagaaagaacggacaattgaacgcttaaaggagcagcgggacagagatgag
cgagagaagcaagaagagattgatacctacaagaaagatcttaaagacttgaaagaaaaa
gtcagcctgttgcaaggagacctctccgaaaaggaggcttctctcttggatctcaaagag
catgcttcttccctggcttcctcaggactgaaaaaggactcacgactcaagacccttgaa
attgctcttgaacagaagaaggaagagtgcctgaaaatggagtcacagctgaagaaggca
catgaagcaacattggaagccagagccagtccagaaatgaatgaccgaatacagcaattg
gagagagagattgctaggtacaaagatgaatctagcaaggcccagactgaagttgatcgc
ctcttggaaattttgaaagaagtggaaaatgagaagaatgacaaagacaagaagatagct
gagttagaaagtctcacttcaaggcaagtgaaagaccagaataagaaggtggcaaatctg
aagcacaaggagcaggtggagaagaagaagagtgcacagatgctggaggaagcccggaga
agggaggacagtctcagcgacagctctcagcagctgcaggacagcctccgtaagaaggat
ggcaggattgaagagctggaagaagcactgagagaaagtgtacagataactgcagagcgt
gaaatggtgctggcacaagaggaatcagccaggaccagtgctgagaaacaggtggaagaa
ctgttgatggccatggagaaggtgaagcaggaactggagtccatgaaagctaaactgtcc
tccactcaacagtccctagcagagaaagagacgcacctcaccaatctccgggcagagaga
aggaagcacttagaggaagttctggagatgaagcaagaagctctgctggctgccattagt
gagaaggatgctaatatagctcttctagagctctcgtcctctaagaaaaagacccaagaa
gaagtggctgcgctgaaacgagaaaaggaccgcctggtgcagcagctcaaacaacagaca
caaaatcggatgaaactaatggctgacaactatgaggacgaccacttcaaaccctcccgc
tccaatcagacgaaccataagccctccccagaccagatcattcagcccctcttagaactt
gaccaaaatagaagcaagttaaagttgtatattggacacctgacagccctctgccatgac
cgagaccccttaatccttcgtggactcactccaccagcttcttataatgcagatgatgac
caggcagcttgggagagtgagctgcagaagatgacccaggagcagcttcagagtgagctg
gagaaagtcgaaggggacaacgcagaactgcaggagttcgccaacaccattctccagcag
atagctgaccactgccctgacatcctcgagcaagtcgtcagtgccctggaagagtcctcc
tga
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