Arvicola amphibius (Eurasian water vole): 119809056
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Entry
119809056 CDS
T08327
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119809056 (Wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119809056 (Wdr82)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119809056 (Wdr82)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119809056 (Wdr82)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
119809056 (Wdr82)
COMPASS/SET1 complex (yeast)
119809056 (Wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
SMN_Tudor
MinC_C
Motif
Other DBs
NCBI-GeneID:
119809056
NCBI-ProteinID:
XP_038177682
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All DBs
Position
3:172440381..172461741
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AA seq
313 aa
AA seq
DB search
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgacagcgtgctgagaagcttccgcgtcgctaaggtgttccgcgagaac
tcggacaagatcaactgcttcgacttcagtcccaatggagagacggtcatctccagcagc
gacgatgactccatcgtgctgtatgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaagtatggtgtggacctcatcagatacactcatgcagctaacacggtcgtttac
agctctaacaaaatagacgatactattcgttacttgtcgttgcatgacaacaaatacatc
agatattttcctggacacagcaaaagggtggtggccttgtccatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcgactctgggatctccggtctcctaac
tgccagggcctcatgcatctacagggcaaaccagtttgttcctttgatccagaagggtta
atttttgctgcaggtgtcaactcagaaatggtcaaactttatgaccttcgttcttttgat
aagggaccgtttgcaacctttaagatgcagtatgatcggacttgtgagtggacaggactt
aagttcagcaatgatggcaaactcatactcatttctaccaatggcagcttcatccgtctt
attgatgcattcaagggtgtggtgatgcacacatttgggggttatgctaacagcaaagct
gttacgctcgaagcttcatttactccagattcacaatttattatgattggttcagaagat
ggcaagatccatgtctggaatggagagagtggtataaaagtagctgtattggatggtaaa
cacacgggtcccattacctgtttgcagttcaaccccaagttcatgacctttgccagcgcc
tgttccaacatggccttctggttgcccaccattgatgactga
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