Arvicola amphibius (Eurasian water vole): 119809872
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Entry
119809872 CDS
T08327
Symbol
Cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
aamp03420
Nucleotide excision repair
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119809872 (Cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
119809872 (Cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119809872 (Cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aamp01001
]
119809872 (Cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119809872 (Cdk7)
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119809872 (Cdk7)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119809872 (Cdk7)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
119809872 (Cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
119809872 (Cdk7)
Protein kinases [BR:
aamp01001
]
Serine/threonine kinases: CMGC group
CDK family
119809872 (Cdk7)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119809872 (Cdk7)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
119809872 (Cdk7)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119809872 (Cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
Haspin_kinase
FTA2
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
119809872
NCBI-ProteinID:
XP_038178984
LinkDB
All DBs
Position
3:47104356..47131427
Genome browser
AA seq
346 aa
AA seq
DB search
MAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDYVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCARITASQALKTKYFSNRPA
PTPGCQLPRPNCPAEALKEQSNPAMATKRKRTEALEQGILPKKLIF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggacgtgaagtctcgagcgaagcgctatgagaagctggacttcctcggggag
ggacagtttgctacggtctataaggccagagataagaacaccaaccagattgtcgccatt
aagaaaatcaaacttggacacagatcagaagctaaagatggtataaatagaacagcctta
agagagataaaactgttacaggagctcagtcatcccaatataattggtctccttgatgca
tttggacataaatctaatattagccttgtctttgatttcatggaaactgacctggaggtt
ataataaaggacaatagtcttgtgttgacaccatcccacattaaagcctacatgttgatg
actcttcaggggttagaatatttacatcagcattggattctacacagggatttgaaacca
aacaacttgttgttggatgagaatggagttctgaaactggcagattttggcctggccaag
tcatttgggagtcccaatagggcttacacgcatcaggttgtgaccagatggtaccgggct
cctgaattactgtttggagctaggatgtatggtgtgggtgtggacatgtgggctgttggc
tgtatattagcagaattgcttctaagggttccttttttgcctggagattcagaccttgat
cagctaacaagaatatttgaaaccttgggtaccccaactgaagagcagtggccggacatg
tgtagtcttccagattatgtgactttcaagagtttccctgggatcccactgcagcacatc
ttcattgcagcaggagacgacttgctcgatctcatccaaggcttgttcctgtttaatcca
tgtgctagaatcacagcttcacaggcattgaagactaagtatttcagtaatcgtccagcg
ccaacacctggatgccagcttccaagaccaaactgtccagcggaagccctaaaggaacag
tcaaatccagccatggcaacgaaaagaaaaagaacagaggccttagaacaaggaatattg
cccaagaagctaattttttag
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