Arvicola amphibius (Eurasian water vole): 119811294
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Entry
119811294 CDS
T08327
Symbol
Cltc
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04142
Lysosome
aamp04144
Endocytosis
aamp04721
Synaptic vesicle cycle
aamp04961
Endocrine and other factor-regulated calcium reabsorption
aamp05016
Huntington disease
aamp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119811294 (Cltc)
04142 Lysosome
119811294 (Cltc)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
119811294 (Cltc)
09156 Nervous system
04721 Synaptic vesicle cycle
119811294 (Cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119811294 (Cltc)
09164 Neurodegenerative disease
05016 Huntington disease
119811294 (Cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119811294 (Cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119811294 (Cltc)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119811294 (Cltc)
Exosome [BR:
aamp04147
]
Exosomal proteins
Proteins found in most exosomes
119811294 (Cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
119811294
NCBI-ProteinID:
XP_038180992
LinkDB
All DBs
Position
4:34485440..34547943
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccctgactatggagtcagataaattcatctgcatt
agagaaaaagtaggagaacaggctcaggtggtaatcattgatatgaatgatccgagcaat
ccaattcgaagaccaatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gccctgaaagctgcaaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcacataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgtcacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgtcattctagcctcgcaggatgccagattatcaattaccgtacagatgca
aagcagaagtggttgcttctgactggcatatctgcacagcaaaatcgtgtggttggagct
atgcagctctattctgtagataggaaagtgtctcagcctattgaaggacatgcagctagc
tttgcacaatttaagatggaaggaaatgcagaagaatcaacattgttttgttttgctgta
cggggtcaggcaggagggaagttgcatatcattgaagttggcacaccacccacagggaac
cagccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagataagtgaaaagcatgatgtggtgttcttgattaccaagtatggt
tatatccacctctatgaccttgagactggcacatgcatctacatgaacagaatcagtgga
gaaacgatcttcgttactgcccctcatgaagccacagctggaataataggagtcaacaga
aagggacaagttctgtcagtttgtgtagaagaagaaaacataattccttacatcaccaat
gtcctacaaaatcctgatttggcccttagaatggctgtgcggaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctcttttcgcccagggaaactactcggaggct
gcaaaggtggccgctaatgcaccaaagggaatccttcgcactccagacaccatccgtcgc
ttccagagtgtcccagctcagccaggtcaaacttcacctctccttcagtactttggaatc
cttttggaccagggccagctaaacaaatacgagtccttagaattatgtagacctgtactt
cagcaagggcggaaacaacttttggagaagtggttgaaagaagataagctggaatgttct
gaagaactgggtgatcttgtaaagtctgtggacccaacattggcacttagtgtgtacctc
agagccaatgtcccgaataaagtcatccagtgctttgcagagacaggtcaagtccagaag
attgttttatatgctaaaaaagttggttatactcccgactggatctttctcctgagaaat
gtaatgcgcatcagtccggatcagggacaacagtttgctcagatgctagttcaggacgaa
gagccgcttgctgatatcacacagattgtggatgtctttatggaatacaatttaatccag
caatgtactgccttcttacttgacgctttgaagaacaatcgcccctccgaaggtccttta
cagacacgattgcttgagatgaaccttatgcacgcccctcaagttgcagatgctattctg
gggaatcagatgttcacccactatgaccgggctcatattgcccagctgtgtgaaaaggcg
ggcctacttcagcgtgcattagaacacttcaccgatttgtatgatattaaacgtgcagtt
gttcatacccatcttcttaacccggagtggttagtgaattactttggatccttatccgtt
gaagactccctagaatgtctcagagccatgctgtctgctaatattcgtcaaaatctacag
atctgtgttcaagtggcttctaagtatcatgaacaactatcaactcagtctctgattgaa
ctctttgaatcgttcaagagttttgaaggtctcttttattttctggggtccattgttaac
tttagtcaggacccagatgtgcactttaaatacattcaggctgcttgcaagactgggcag
atcaaagaagtggaaagaatctgcagagaaagcaactgctatgatcccgagcgagtcaag
aactttctcaaggaggcaaaactaacagatcagttgccacttatcatcgtctgtgatcgg
tttgactttgtccatgacctggtgctgtatttatatagaaacaatctccaaaaatatata
gagatatatgtccagaaggtaaatccaagtcgactccctgtggttattggagggttgctt
gatgttgactgctctgaagatgtcattaaaaatttgattcttgttgtgagaggtcaattt
tctactgatgagcttgttgcagaagtggaaaagagaaacagattgaagctgcttctgcct
tggcttgaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatatacattgacagtaataacaacccagagagattccttcgtgaaaacccctattat
gacagtcgtgttgttggaaagtattgtgagaagagagacccacatctggcttgtgtcgct
tacgaacgtggtcagtgtgacctggagctcatcaatgtttgtaatgagaattccctcttc
aaaagcctttcccgctacctggtccgtcgtaaagatccagaattgtggggtagtgtgcta
ctggaaagtaatccatacagaagaccactgattgaccaggttgtacagacagccttgtct
gaaactcaggacccagaagaagtgtcagtaactgtgaaggcttttatgacagcagatctt
cctaatgaactcattgaactcctggagaaaattgtacttgataactctgtattcagtgaa
cacaggaatctgcaaaatctcctcatcctcactgcaattaaggctgatcggacacgtgtt
atggagtatattaaccgcctggataattatgatgctccagatattgctaacattgccatc
agcaatgaactgtttgaagaagcatttgctattttccggaagtttgatgtcaatacttca
gcagttcaggtcttaattgaacatattggaaacctggatcgtgcatatgagtttgctgaa
cgctgcaatgagcctgctgtttggagtcaacttgcaaaagctcagttgcagaaaggaatg
gtgaaggaagccattgattcttacatcaaagctgatgatccttcatcctacatggaagtt
gttcaggctgccaacaccagtggaaactgggaagaactggtgaagtatttgcagatggca
cgaaagaaggctcgagagtcctatgtggagacagaattgatatttgcgctggctaaaaca
aaccgccttgcagaattagaagagttcatcaatgggccaaataacgctcatattcagcaa
gttggtgatcgttgttatgatgaaaaaatgtatgatgctgcaaagctgttgtacaataat
gtttctaactttggacgcttggcatctacccttgttcaccttggtgaatatcaggcagca
gttgatggtgctagaaaagctaatagtacccgaacctggaaggaggtctgctttgcctgt
gtagatggaaaagagttccgtcttgctcaaatgtgtgggcttcatattgtagtacatgca
gatgagttagaggaacttatcaactactatcaggaccgtggatactttgaagaactcatc
accatgttggaagcagccttgggactggagcgagctcacatgggaatgttcacagaacta
gctattctgtattctaaattcaaaccacagaaaatgagggagcacctggagttgttctgg
tcgagagtgaatattcctaaggtgctgagagctgcagaacaagctcatctttgggcagag
ctggtgttcctgtatgacaagtatgaagaatatgataatgccataatcaccatgatgaat
catcccaccgatgcatggaaggaaggacagttcaaggatatcattaccaaggtggccaat
gtggaactctactacagagcaatccagttctacttagaattcaagcctctgttgttaaat
gacttgctcatggtgctgtctccacggttggatcacactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttgcgctccgtccagaaccacaacaac
aagtctgtaaatgaatcactgaacaacctctttattacggaagaagattaccaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcacttgctcagcgtttggaa
aaacacgaactcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagcgtagagctgtgcaagaaagacagcctttacaaggatgcaatgcagtat
gcctctgaatctaaagatacagaattggctgaagaacttctacagtggtttttgcaggaa
gaaaaaagagagtgcttcggggcttgtctctttacctgttatgatctcttaaggccagac
gtcgtcctggaaactgcatggaggcacaatatcatggatttcgccatgccctatttcatc
caggttatgaaggaatatttgaccaaggtggataaattagatgcttcagagtcattgaga
aaagaagaagaacaagctacagagacacagcccatcgtttatggtcagccccagctgatg
ctaacagcaggacccagtgtggcagtccctccccaggcaccttttggttatggttacact
gcaccaccatatgggcagccacagcctggctttgggtacagcatgtaa
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integrated database retrieval system
