Arvicola amphibius (Eurasian water vole): 119814737
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Entry
119814737 CDS
T08327
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05012
Parkinson disease
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
119814737
05022 Pathways of neurodegeneration - multiple diseases
119814737
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank_5
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
119814737
NCBI-ProteinID:
XP_038186678
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Position
5:128263976..128336273
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AA seq
915 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSSWNCGVSTLITNP
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNENDDQKNNTVEYQKGGETDQGPQPEELS
TEDGVRGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLASFTKVSSEKRILGLC
TTINGLSGKACPIGSTENSTPNMTPFCVLSPVKSPHLRKASTVLRDQHKLCTEDSESLPA
LGKCAPAYESENHSKDFLNKAFSDPHSRKIEKAGPDCKLRAFHLQSSAAGAKPEEQVNGM
NWTNAQGTEERSENLKKVRSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHVAASKG
HAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFP
SLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGA
NVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQS
QLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWRILDADDEATGKSKTGAQEGIQVLGSL
SASSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDTQASSRNLKKIPLEKRE
LKLARLRQLMQRSLSESDTDSNNSEDPKNTPVRKADRPRPQPIVESVENMDSAESLHLMI
KKHSLPSGRRFPFSTKASKSLDGHSPSPTSESSEPDLDSLCPGLGLTPPTQPSADFTQSS
PDSSAAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKDRGR
APQRTSESGEQMKRPFGTFRSIMETLSGNQNNNNNYQPATQLKTCTLPLTSLGRKTADPK
GNPVSPASKGKNKAA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgactttagtgatgacatttcttat
tcagtcacatctctcaagaccatcccagaactgtgcagaagatgtgattcccaaaatgag
gacagatcagtttcaagctctagctggaattgtggtgtctcaactctcattacaaaccca
caaaagcccactggaattgctgatgtatacagtaagttccgcccagtgaagcgcgtgtct
ccgctgaaacatcagccagagacgctggaaaacaatgaaaatgatgaccaaaagaacaat
acagtagagtaccagaaaggcggggagactgaccagggcccccagccggaggaactcagc
actgaagatggagtcagggggttgccaggtaagggctctgagcccagccaggcactgggc
gagctggaacattacgaccttgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagctggcctcattcactaaggtgtcttcagagaagaggattttgggcttatgc
acaaccatcaatggcctttctggtaaagcctgtcctattggaagcactgagaactccaca
cccaacatgactccattttgtgttctttctcctgtgaaaagtcctcacttgaggaaagca
tcgactgtcctccgggaccagcacaagctctgcacagaagactctgagagcttacctgct
ctgggtaaatgtgcccctgcgtatgagtccgagaaccacagtaaagacttcctgaacaag
gcctttagtgatccccatagccgaaaaattgagaaggcggggccagactgcaagctcagg
gccttccacctgcagtcctcagcagcaggggctaaaccggaagagcaggtcaacggcatg
aactggaccaatgcccaaggcacagaagaaaggagtgagaacctgaagaaagtaagaagc
atactgaacatcgtgaaagaaggacagatatcgctcttgccacacctagccgcagacaat
ctggacaaaattcacgacgagaatggaaacaatctgttacacgtcgctgcatcgaagggg
catgcagaatgtctgcagcacctcacgtctctgatgggcgaagactgcctcaatgaacgg
aacgcagagcagctgactccagcgggtctggccatcaagaatggccagctggagtgtgtg
cgctggatggtgagcgagacagaagccattgcagaattgagttgctccaaggacttccca
agccttattcattatgcaggttgctatgggcaggagaagattctcctgtggcttcttcag
ttcatgcaagaacaaggcatctcgctggacgaagtggaccaggaaggcaacagtgctgtt
cacgtcgcctcccagcatggctaccttggatgcatacagaccctggtggagtatggagca
aatgtcactatgcagaaccacgctggggaaaagccctcccagagtgctgagcggcatggg
cacaccctgtgctcccggtacctagtggtagttgagacctgcatgtcactggcctcacaa
gtggtaaagttgaccaagcagctaaaggaacagacagtggagcgtgtcacattgcagagc
caactccagcaacttctagaagcccaaaaatcagagggcaaatcactcccttcttcaccc
agttcaccctcctcaccagcttctagaaagtcccagtggagaatcctagatgcagatgat
gaggctacaggcaagagcaaaacaggagcccaggagggaatacaagttcttggaagctta
tcagcatccagcagggctaggaccaaaggaaaagatgaagactctgataaaatcctacgt
cagttattgggaaaagaaatctcagagaatgtctgcacccaggaaaagctgtcattggaa
ttccaggatactcaggcatcctctaggaatctgaaaaaaattcccctggagaagagagaa
ttgaagctagccaggctgaggcagctgatgcagaggtcattgagcgaatctgatacagac
tcaaacaactctgaagaccccaaaaatactcctgtgagaaaagcagacaggcccaggcca
cagcccattgtggaaagtgtggagaatatggacagcgcagaaagcttacacctgatgata
aagaaacactctctgccatcaggacgccggtttcctttcagtacaaaggcctccaaatcc
ctggatgggcacagcccatctcccacttcagagagcagtgaaccagacttggactccctt
tgtccaggcttggggctgactcctcccacccagccttctgcagacttcactcagtccagt
cccgacagttccgctgcccagaaagttgccacgagccccaagagtgccctcaagtctcca
tcatccaagcgccggacatcccagaactcaaaactcagagtcacctttgaggagcctgtc
gtgcagatggagcaaactagccttgaactaaatggagaaaaggacaaagataggggcagg
gccccccagaggactagtgagtcaggggaacaaatgaaaagaccttttggaaccttccga
tccattatggagactttaagtggaaatcaaaacaacaataacaactaccagccagccacc
cagctgaagacctgcacactgcccttaacatcacttggaaggaagacggcagatcccaag
ggaaaccccgtgagccctgctagcaaaggaaagaataaggctgcataa
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