Arvicola amphibius (Eurasian water vole): 119826609
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Entry
119826609 CDS
T08327
Symbol
Trpc3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
aamp05017
Spinocerebellar ataxia
aamp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119826609 (Trpc3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
119826609 (Trpc3)
05022 Pathways of neurodegeneration - multiple diseases
119826609 (Trpc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119826609 (Trpc3)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119826609 (Trpc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
119826609
NCBI-ProteinID:
XP_038203942
LinkDB
All DBs
Position
11:38355899..38423009
Genome browser
AA seq
910 aa
AA seq
DB search
MSTKVRKCREPARVTLPAPEEEDDGEAEGAESQRRRRGWRGVNGGLEPPCQRAPPSPGPD
ASSEGSPSRWRTAGMRDKGRRQAVRGPAFMFGSRGPSLTAEEERFLDAAEYGNIPVVRKM
LEESQTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIV
EAILGHPGFAASRRLTLSPCEQELRDDDFYAYDEDGTRFSPDITPIILAAHCHKYEVVHL
LLLKGARIERPHDYFCRCADCAEKQRLDAFSHSRSRINAYKGLASPAYLSLSSEDPVLTA
LELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLE
THRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVAL
GLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGISTLPNIT
VIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYIVQLWNVLDFGMLS
IFIAAFTARFLAFLQATKAQQYVDNHVQESDLSEVTLPPEVQYFTYARDKWLPSDPQIIS
EGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFIL
YSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTM
VVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVY
FIMRITNLSKCRRRRLQKDLELGMGNSKSRLNLFTQSNSRVFEPHSFNSILHQPTRYQQI
MKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELGILIHKLSE
KLNPSVLRCE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgccgggagcccgcgagggtgaccttgcctgcgccggag
gaggaggatgatggcgaggccgagggagccgagtcgcagcgccgccgccggggctggagg
ggtgtcaacggcgggctggagccgccctgccagcgcgcgccgccgtccccggggcccgac
gcgtcctcggagggcagcccgtcgaggtggcgcactgcagggatgcgtgacaagggccgg
cgccaggcggtgcgtggcccggccttcatgtttggttctcgtgggcccagcctcacagct
gaggaggagcgcttcctggacgctgcagagtacggcaacatcccggtggtgcgcaagatg
ctggaggagtcccaaacgctcaacgtcaactgtgtggactacatgggccagaatgcactg
cagttggctgtcggcaatgagcatctggaggtgactgagctgctgctgaagaaggagaac
ctggcacgtatcggtgatgcgctgttgctagccatcagcaagggctatgtacgcatcgtg
gaggccatcctcggccacccaggctttgcggccagccggcgcctgacacttagtccttgc
gagcaggaactgcgggacgatgacttctatgcctatgatgaggatggtacacgcttctcg
cctgacatcacgcccatcatcctggctgcacactgccataagtacgaggtggtgcacctg
ctgctgctcaagggcgcgcgcatcgagcggccccacgactacttctgtcgctgtgccgac
tgtgccgagaagcagcggcttgatgccttcagccactcgaggtctcggatcaacgcttac
aagggactggccagccctgcatacctgtcgctctccagcgaggaccctgtgctcacggcc
ctggaactcagcaatgagctggccaagctagctaacatagagaaggagttcaagaatgac
tacaggaaactctccatgcaatgcaaagactttgtggtgggtgtgttggacctgtgtcgg
gactcggaagaggtggaggccattctgaatggagatctggagtcagcagagcccctggag
acacacaggcacaaggcttccctgagtcgtgtcaaacttgccattaagtacgaagtaaaa
aagttcgtggctcaccccaactgccagcaacagcttctgacgatctggtatgagaatctc
tctggccttcgggagcaaaccattgctatcaagtgcttggtggtgctggtcgtggccttg
ggccttccgttccttgccattggctactggattgcaccttgtagcaggctggggaaaatt
cttcgaagccctttcatgaagttcgtggcacacgctgcctctttcatcatctttctgggt
ctgcttgtgttcaacgcctcggacaggtttgaaggtatcagcacgctgccgaatatcact
gttattgactaccccaagcagatcttcagggtgaagaccacccagttcacatggacggaa
atgctaattatggtctgggttctcgggatgatgtggtccgagtgcaaggagctctggctg
gaaggaccccgggagtacatcgtgcagttgtggaacgtgctcgacttcggcatgctctct
atcttcatcgctgccttcaccgccaggttcctggctttcctgcaggccacgaaagcgcag
cagtatgtggacaaccacgtgcaagagagcgacctgagcgaagtcacgcttccgcctgag
gttcagtatttcacctatgctagagataaatggctcccttctgaccctcagatcatatcc
gagggcctctatgccatagccgtggtactcagcttctcccggatcgcatacattctccct
gcaaatgagagctttgggcccttgcagatctctcttggaaggactgtgaaggacatattc
aagttcatggttctgttcattatggtgtttctggcgttcatgattggcatgttcatcctt
tattcttactaccttggggccaaagtcaatcctgcttttaccactgttgaagaaagtttc
aagacgttgttttggtccatatttggactgtctgaagtgacttctgtggtcctcaaatat
gatcacaagttcatcgagaatattggatatgttctttacggaatatacaatgtaaccatg
gtggtcgttttactcaacatgctaattgctatgattaatagctcataccaagaaatcgag
gatgacagcgacgtcgagtggaagtttgcgcgttcaaagctttggttatcctactttgac
gacgggaagacgctgcctccgcccttcagcctggtccctagtccaaaatcctttgtttac
ttcatcatgcggatcactaacctttccaaatgcaggaggagaagactgcagaaggatctg
gagttgggaatgggtaactccaagtccaggttaaacctcttcactcagtctaactcgaga
gtttttgaaccacacagttttaacagcattctccatcagccaacgcgctatcagcagata
atgaaaagactcataaaacggtatgttctgaaagcacaagtagacaaagaaaatgacgag
gtgaatgaaggtgaactgaaagaaatcaagcaggatatctccagcctccgttatgaactt
ttggaagacaagagccaagcaacggaagaactaggcatcttgattcacaaactcagtgag
aaactgaaccccagtgtgctgagatgtgaatga
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