Anguilla anguilla (European eel): 118217980
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Entry
118217980 CDS
T07545
Symbol
col21a1
Name
(RefSeq) collagen alpha-1(XXI) chain isoform X1
KO
K16629
collagen type XXI alpha
Organism
aang
Anguilla anguilla (European eel)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
VWA_3
Laminin_G_2
Laminin_G_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
118217980
NCBI-ProteinID:
XP_035256143
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Position
18:complement(23089365..23149676)
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AA seq
1034 aa
AA seq
DB search
MWETGRGEGRLSHAGETSAEHSLQKASVSPAAPRSHARSVSLNRGPDSRYARAAPGGTGA
GLFHTMAYRRQNRHLCLQSLAPLLLLSLCVAQREDMRSSCRTAPSDLVFILDGSWSVADT
NFEIVKRWLVNITTQFKIGQEFTQVGVIQYSDDPHLHVPLGSRYSGEKLINAMESIEYMG
GNTNTGKAIQFASDRLFATSERAPNGVAKIAVVLTDGKSQDEVSEAAEEARRKGVTLFAI
GVGEEAVEWQLKAIANKPHSTYVFYVEDYMAISKIREVIRQKLCEETVCPERIPVNSRGE
KGFDMLVHLNLAKKAKKTQGSFYGKKAYQVTSRVDLSESTRSLFPDGLPPSYVFVATLKY
KGSVAMEKWDLWRVQTKDGEPQMAVTLNGLHRTVMFTTTSMDASATQTVVFKQSAAKRLF
DEQWHQLRLLVTEEDVTLYVDDSEIETLPLEPPDGIFVNGQTQVGKYVSKETTVPFEIQK
LRIYCDPEQNTRETACEIPGVDGECANGPSDFEYEPTPEPCTCPAGPPGPSGLKGEAGRP
GDPGQPGPAGAEGKPGIPGISGSPGLQGPPGVQGQRGEPGVPGQTGGPGDSGKPGVPGLP
GSQGPPGEKGSIGLLGEPGLPGKDGNKGEKGSRGLAGTPGYPGPRGHPGLDGKDGTPGSN
GRKGEAGIPGNPGMEGREGHPGMPGVPGNEGRSGLKGEAGLPGEKGSRGTAGSQGERGTP
GVPGTDGQPGTKGSKGEPGQPGQSGLPGTEGKPGDPGVAGQPGLSGRPGVQGLKGDQGEQ
GQAGIQGTKGEKGDQGRPGGQGSAGLPGQRGEKGTSGEQGLRGQNGHQGSPGMPGHMGPS
GPRGLSGDAGPVGPPGPSGRPGREMSEQQIRQICREVLRTEIPSLFGSRQPRVCERCHSR
AGSPGPQGPLGPAGPRGLRGFPGEPGANGLQGHPGQPGQAGVPGMKGETGERGEKGSQGR
TQTGDLGPPGPQGPMGPPGHGKPGYPGKPGPPGLNGKEGKQGYPGTPGQPGVCHPSFCYG
AMVRRDSFRKGPNY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaacgggacggggagagggcaggctctctcacgctggagaaacatctgccgaa
cacagcctccagaaagccagcgtctctccggcggctccgcgcagtcatgcccgctcggtc
tcgctgaatagaggaccggactcccgctacgcgcgcgctgctccaggtggtactggagca
gggctcttccacaccatggcctacagacggcagaaccgacatctgtgtctccagtccctc
gccccgctgctcctgctctctctctgcgtcgcacagcgggaggacatgagatccagttgc
agaacggctccgagcgatctagtgtttattctagacggttcttggagtgtggccgacact
aactttgagatagtcaaacggtggctggtgaacatcaccacccagttcaaaatcggccag
gagttcacgcaggtgggcgtgatccagtacagcgacgacccccacctgcacgtcccgctg
gggagccgctactccggcgaaaagctcatcaatgccatggagtccatcgagtacatgggc
ggcaacaccaacacggggaaggccatccagttcgccagcgaccggctcttcgccacctcc
gagcgcgcgcccaatggcgtggcgaagatcgccgtggtcctcacggacgggaagtcgcag
gacgaggtgtcggaggcggccgaggaggcacggaggaagggcgtcaccctgttcgccatc
ggggtgggcgaggaggcggtggagtggcagctgaaggccatcgccaacaagccgcactcc
acctacgtcttctacgtggaggactacatggccatctccaaaatccgcgaggtgattcga
caaaagctgtgtgaagaaacggtgtgcccagagagaatccctgtgaacagtcgcggcgag
aaaggctttgatatgctggtgcatctgaacttggcaaagaaagccaaaaagacgcaaggc
tctttctacggtaaaaaagcctaccaggtgacctcgcgcgttgacttaagcgaaagcaca
aggtctctgtttcctgacggcctgcccccctcctacgtgttcgtggccacgctgaagtac
aagggctcggtcgccatggagaagtgggacttgtggagggtgcagaccaaagacggggag
ccccagatggcggtcacgctgaacgggctccaccgcacggtcatgttcaccaccaccagc
atggacgccagcgccacccagaccgtggtcttcaaacagtctgcggccaagagactcttt
gacgagcagtggcaccagctgcgtcttctggtcaccgaagaagatgtcaccctttacgtc
gacgactcggagatcgaaactttgcctctggaacctccggacggcatcttcgttaacgga
cagacacaagtcgggaaatatgtcagcaaagaaactaccgtaccgtttgagatccagaag
ctgaggatctactgcgaccccgagcagaacacgcgtgagacggcctgcgagatccctgga
gtagacggtgagtgtgccaacgggcccagcgactttgaatacgagcccacgccagagccc
tgcacctgtcctgccggacctcccggaccgtcgggcctgaagggggaagctggaagacct
ggagacccaggccaacctggtcctgcaggtgctgagggtaagcctggaatccctggcata
agtggcagtccaggactccaaggcccaccaggtgtacagggccaacgaggggagcctggc
gttccggggcaaacaggagggcctggtgactcgggaaagccaggtgttcctgggttacct
ggatcccaggggccaccaggtgaaaagggatccattggccttctaggggaaccagggtta
cctgggaaagatgggaataagggagaaaaaggaagccgaggacttgcggggacacctggc
tatcctggccctcgtggacaccccgggctcgacgggaaggacggaacgccaggaagtaac
ggccgaaagggggaagctgggatcccagggaaccccggtatggaaggacgggagggacac
cctggcatgcctggcgtaccagggaatgaaggccggagtggactgaagggtgaggctggt
ttgcctggagaaaaggggtcaagaggtacggcaggctcacagggtgagaggggaacgccc
ggggtgccagggaccgacggacaaccaggaacgaagggaagtaaaggtgaacctggccaa
cctggacaatccggtctcccgggaacagagggaaaaccaggtgacccaggagtagcagga
cagccaggtctctcaggccgaccaggggttcaaggactgaagggagaccagggtgagcag
ggccaggcaggaattcaggggaccaaaggtgaaaaaggagaccaaggccggccggggggt
caggggtccgccggtcttcctgggcagagaggagagaaagggacctcaggagagcagggg
ctgaggggccagaatggtcaccagggctcccctggcatgcccggccacatgggcccctcc
gggccccggggactgagtggagacgctgggccagtgggcccgcctggaccgtcagggaga
cccggtagagagatgtcagagcagcagattcggcagatttgtcgggaagttctgaggacg
gagatcccgtctcttttcggaagccgccagcccagagtctgtgagcgctgccactcccgg
gcggggtccccgggcccccaaggcccgctgggccccgcaggaccccggggactgaggggg
ttccctggggagcccggagccaacggtctgcagggacacccaggccagccagggcaagcg
ggagttccagggatgaaaggggagacaggagagagaggcgaaaagggaagtcaaggccgt
acccagactggggatctgggaccccctggacctcaaggtccaatgggccccccagggcac
gggaaacctggttaccctgggaaacccggccccccaggcctgaacgggaaggaggggaag
caggggtaccccggcacccccggccagcccggcgtgtgccacccctccttctgctacggt
gctatggtcaggcgggactccttcaggaagggcccaaactactga
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