Anopheles arabiensis: 120898646
Help
Entry
120898646 CDS
T07381
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
aara
Anopheles arabiensis
Pathway
aara04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
aara00001
]
09150 Organismal Systems
09151 Immune system
04624 Toll and Imd signaling pathway
120898646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aara03000
]
120898646
Transcription factors [BR:
aara03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120898646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Death
TLP-20
Phage_r1t_holin
GP79
Motif
Other DBs
NCBI-GeneID:
120898646
NCBI-ProteinID:
XP_040160710
LinkDB
All DBs
Position
2:88122520..88133968
Genome browser
AA seq
1157 aa
AA seq
DB search
MSLEHWSVALDVLLQQLQQQPPHHLLDIAPPYHLQTEQQQLLGTSPIQYTVLSMDTPSPS
SSAAAAAVVSVGEFTLGPGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPESSASDQ
SAAYTLQNLNLSSSAGTMNYPGMGYQQQQQQQHQQQHQHQQLQQQQHHYYTPQLLNLDQE
HLQTQTFTYVTSSNEAFAAPEPNYSEPHLVILEQPVDKFRFRYQSEMHGTHGSLMGSRTE
KSKKTFPTVELRGYGGEAKVRCSLYQVDPQRRAPHSHHLVIKSGELDLIDPHDLDVGGAA
GAAEPSEGVGGDGKYVATFQGMGIIHTAKKFIAEELYKKLRKHRLCELNREPTEREEQQM
QKEAAVMARTMNLNQVCLCFRAYRVEPGTGRWVPICEPVYSNPINNMKSALTGELKICRL
STTVSGVDGGEEVFMFVEKVCKNNIKIRFYELDEYDQEVWQEMAIFSEADVHHQYAIAFK
TPPYRHKDITEPVEVLMQLFRPRDRCQSEPVLFKYKPRPGMMVVPGAGAASGASRKRLRI
SSGNVSSEIPTVIQNDPNGPVGPAGVGGGGGGGGGGGGGGGAIGSGSTTRLPPLHQPFPM
LANHAGGGAIPEGQEPTSTTSLTTSAHHTDLMSGIGSTTTISKELTKASIIQEILNIPTT
IASDVAFDSSDFPCNSEEFNKLIQEIGNQQDLVKLETDAETAGGGATDTESVLGRAIADL
VASGDDSRQGEMLRKLLALIKLFAGDVNRSRQLLASHWTAANQQQLNCLHAAIRRNDTTI
ACKLIELLHEYQLAEELLDLPNDRNETGLHLAVSCNSEPIVKALLGAGAKLHFCDYRGNT
PLHRAVVENVPDMVRLLLLQRRPGQPGGLRLDCTNDDGLTALQAAVYARNLKITRILLEA
GASVREKDLKHGNNILHIAVDNDALDIVHYILEEVKEELGRERNNAGYTPLQLADAKSHT
GQGNNKLIVRELLRHYPDGLQKEVKKEVDATEDDEEEEEEEEEEEDEDEEGEEHGQREAS
APSSNVLDSMDLINGERATIARLLEEHEPEVEPQRKTTKRSDSGPDRTEPDTLFDEQCLE
ELCRLLDAGNGWRELGSLLDFHSFFTVWEQAPSPARMLLGYFEMQQLHLDRLIDMLRVLE
LRDPIRSIDEMICRRMK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccctagagcactggtctgtcgcgctggatgtactgctgcaacagcttcaacagcag
ccgccacaccatttgctggacatcgctcccccctaccatttgcaaacagagcaacaacag
ctgctgggcacgtccccgatccagtacaccgtcctgtcgatggacacaccgtcgccgtcg
tcgtcggcagcagcagcagcagtggtcagtgttggagagtttacgctcggcccgggtcgc
acctatgccagtgcgctttcgccatcgtcatcgtccgcatcgccatcgtcaccgtcgtcg
gtcgcatcgcccaacagccgggccagcaacatgtccccggagtccagtgccagcgatcag
agtgctgcctatacgctgcaaaacctgaacctttccagtagcgccggcacgatgaactac
cctggcatgggttatcagcagcagcagcagcagcaacatcaacaacaacatcaacatcaa
caacttcaacagcagcagcatcactattacacaccgcagctgctgaatctcgaccaggag
catctgcaaacgcaaaccttcacgtacgtcacatcgtcgaacgaagcgtttgccgcaccg
gaaccgaactacagcgagccgcatctggtgatcctggagcagccggtggacaagtttcgc
ttccgctaccagtcggagatgcacgggacgcacggttcgctgatgggcagccgcacggag
aagtcgaagaaaacgttcccgaccgttgagctgcgtgggtacggtggggaggcgaaggtg
cgctgctccctctatcaggtggatccgcaacggcgcgccccccattcgcaccatctggtg
atcaagtccggcgagctggatctgatcgatccgcacgatctggatgtgggtggcgcggcg
ggagcggctgaaccgtcggagggtgttggcggggacggcaagtatgtggccacctttcag
ggtatgggcatcatacacacggcgaagaagttcatcgccgaggagctgtacaagaagctg
cgcaagcatcggctgtgcgagctgaaccgggagccgaccgagcgcgaggagcagcagatg
cagaaggaggcagccgtaatggcgcgcacgatgaaccttaatcaggtgtgcctgtgcttc
cgggcgtaccgggtggagccgggtacgggccgctgggtcccgatctgtgagccggtctac
tcgaacccaatcaacaatatgaaaagtgcactcacgggcgagctgaagatctgccggctc
agcaccaccgtcagcggggtggacggtggcgaggaggtgtttatgtttgtcgaaaaggtg
tgcaaaaataacatcaagattcggttctacgagctggacgagtacgaccaggaggtgtgg
caggagatggccatcttttccgaggcggacgtccatcaccagtatgcgatcgcgttcaag
acgccaccgtaccggcacaaggacattaccgagccggtcgaggtgctgatgcagctgttc
cggccgcgcgaccggtgccagagcgagccggtactgttcaagtacaaaccgcggcccggc
atgatggtagtgccgggggctggtgctgctagtggtgcgtcgcgcaagcggctccgcatc
agctcgggcaatgtgtcgtccgaaattcccaccgtcatccagaacgacccgaacgggcct
gttggacccgctggagtaggtggtggtggaggtggaggaggaggtggtggcggtggtggt
ggtgctatcggttcaggatcaactacacgactaccgcccctgcatcaaccatttccaatg
ctggccaatcatgctggcggcggtgccattccggaaggtcaagaacccacgtcgaccaca
tcgcttacgacgtcagcccatcatacagaccttatgagcgggatcggttccaccaccacc
atctccaaggagctaacgaaggccagcatcatccaggagatactgaacattccgacgacg
atcgcgtcggacgtagcgttcgactcgagcgactttccctgcaactcggaagaattcaac
aaactcatccaagagatcggcaatcagcaggatctggtcaagctggagacggacgcagaa
acggctggcggcggcgccaccgatacggaaagtgtgctgggacgggcgattgccgatctg
gtcgcgtccggggacgattcgcggcagggcgaaatgttgcgcaagctgctcgccctgatc
aaactgttcgccggggacgtgaatcgctcgcggcagctgctggcctcccactggaccgct
gccaatcagcagcagctcaattgcctgcacgctgcaatccgacgcaacgatacgacgatc
gcctgcaagctgatcgagctgctgcacgagtaccagctggcggaggagctgctcgatctg
ccgaacgatcgcaacgaaaccggcctccatctggccgtgtcgtgcaacagcgagccgatc
gtgaaggcgctgctgggggccggcgcgaagctgcacttctgcgactaccgcggcaacacg
cccctgcaccgggcggtcgtcgagaatgtgcccgatatggtgcggctgctgctgctgcag
cggcggcccggccagccgggaggtttgcggctcgactgcaccaacgacgatgggttgacc
gcgttacaggcggccgtgtatgctcgaaatttgaaaatcacgcgcatcctgctggaggcg
ggtgcatcggtgcgcgagaaggacctcaagcacggcaacaacatccttcacattgcggtc
gataatgatgcgctcgatatcgtgcactacatactggaggaggtgaaggaggagctcggt
cgggagcggaacaatgccggctacacgccgctgcagctggccgacgcgaagagccacacc
gggcagggcaacaacaagctgatcgtgcgggaactgttgcgccattacccggatgggttg
cagaaggaggtaaagaaggaggttgatgccacagaagacgacgaggaggaagaggaggag
gaagaggaggaggaagacgaggatgaggaaggggaggagcacgggcagagggaagcatcg
gcaccgtcaagcaacgtgctcgattcgatggatctgatcaacggtgagcgggcaaccatt
gcgcgactgctggaggagcatgagccggaagtggaaccgcagcgcaaaaccaccaagcgg
tcggacagtggcccggatcgaaccgaacccgatacgctattcgacgagcagtgcctggag
gagctgtgccggctgctggacgcaggcaatggctggcgcgagctcggttcgctgcttgac
tttcactcattttttaccgtgtgggagcaggcgcccagcccggcacggatgttgctcggg
tatttcgagatgcagcagctccacctggaccggctgatcgatatgctgcgcgtgctggaa
ctgcgcgaccccatccgcagcatcgacgagatgatctgccggcggatgaagtga
DBGET
integrated database retrieval system
