Alteromonas australica DE170: EP12_18220
Help
Entry
EP12_18220 CDS
T03858
Name
(GenBank) ATP-dependent DNA ligase
Organism
aaus
Alteromonas australica DE170
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
ATG5_UblB
PX
Motif
Other DBs
NCBI-ProteinID:
AJP45269
LinkDB
All DBs
Position
4041925..4043508
Genome browser
AA seq
527 aa
AA seq
DB search
MKAFSELLEQVYFTSSNNAKAELIKAYLAATPDPDRGWAIAAMAGTLKFDFFKRNTIKKL
ISENVDPALFAMSYDYVGEVSETVAHLWPHYTPVSPLPSLSETVETFQHVSRKNVSTTLA
QYLSKMTPAQRWALLKLGTRGLRIGVSARSIKHILADYGNKDIKDIETLWHGVKPPYTEL
LEWLDNKAPKPDISGHVTFHPVMLSHPIEDKEIDTFTPKDWQIENKFDGIRVQLSCHTGA
ADPEKALYSRTGDDISQSFPDLLGAVSGHMVLDGELLVMHGDTVDTFNALQQRLNKKRPS
QTLLSSLPAALMVYDALVLDGKDMTHLPLVQRRQQLEKYLSKGAPERLHLSPLLQADSVN
DLRDLHQSVCENRAIEGLMLKRLDSTYVPGRPKGQWYKWKRDALTVDAVIMYAQRGHGKR
SSFYSDFTFGAWQGERLLPIGKAYSGFTDEELKKLDNWVRRNAIGRFGPVREVKKSLVVE
VAFDAVHPSSRHKSGVAMRFPRIHRIRWDKPAEQADTLASVKSLIET
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcgttcagtgaattactagaacaagtgtattttacatcgagtaataatgcgaaa
gcggagcttattaaagcctatttagccgccacgcccgatccggatagggggtgggcaatt
gcagccatggccggaacattgaagttcgacttttttaagcgaaatacaataaagaaactg
attagcgaaaacgtggacccggccctttttgcgatgagttatgattatgtaggcgaagtc
agtgaaactgtggcgcatttatggcctcactacacgcccgttagccctttgccttcactt
agtgaaaccgtagaaacctttcaacatgtcagccgaaaaaacgtatcaactaccttagct
caatacctttctaaaatgacacccgcgcaacgctgggcactacttaagctgggcactaga
gggcttagaataggagtatctgcccgttccattaaacacatattggcagactatggaaat
aaagatatcaaggacattgaaaccttgtggcatggcgtaaagccaccttatacagaactg
cttgaatggttagacaacaaggcgccaaaaccagatatttctggccacgtgacctttcac
cccgtgatgctatcccaccccatagaagacaaagagattgatacgttcacccccaaggat
tggcaaatagaaaacaagtttgatgggatacgggtacaactttcttgccacactggtgcc
gccgaccctgaaaaggcactttattcaagaacgggggatgatattagccagagttttcct
gacttgctaggcgcggtatcaggtcatatggtattagatggtgagctgctcgtcatgcat
ggcgacacggtagacaccttcaatgcgttacagcaacgcttgaacaaaaagcgcccttct
caaactctactatcctccttgcccgctgcccttatggtatatgacgcccttgtattagac
ggtaaagatatgactcaccttcctttagtacagcgtcggcagcaacttgaaaaatacctg
tccaagggggcacctgaacgccttcatttatcacccttactgcaggccgattcagtcaat
gacctgcgtgatttacatcaaagcgtgtgtgaaaatcgtgcaatagaaggtttaatgctg
aagcgtttagatagcacttatgtaccggggcgacctaaaggacagtggtataagtggaag
cgagatgcgctcactgtagatgcggtgattatgtatgcacaacgtgggcatggaaagcgc
tctagcttttactccgactttaccttcggagcatggcaaggtgagcggttattacccata
gggaaagcctattctggctttaccgatgaggagttaaaaaagctagacaattgggttagg
cgcaacgctattggccgctttggcccagtaagggaagtgaaaaaaagcttggtggttgaa
gtggccttcgacgccgtgcacccatcaagtagacacaagtcgggggttgctatgcggttt
cctaggatccacagaattagatgggataaaccggccgaacaagccgatacccttgcaagc
gttaagtcgctcattgaaacctaa
DBGET
integrated database retrieval system