Aceticella autotrophica: ACETAC_08650
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Entry
ACETAC_08650 CDS
T09086
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aaut
Aceticella autotrophica
Pathway
aaut03030
DNA replication
aaut03410
Base excision repair
aaut03420
Nucleotide excision repair
aaut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACETAC_08650 (ligA)
03410 Base excision repair
ACETAC_08650 (ligA)
03420 Nucleotide excision repair
ACETAC_08650 (ligA)
03430 Mismatch repair
ACETAC_08650 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaut03032
]
ACETAC_08650 (ligA)
03400 DNA repair and recombination proteins [BR:
aaut03400
]
ACETAC_08650 (ligA)
Enzymes [BR:
aaut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACETAC_08650 (ligA)
DNA replication proteins [BR:
aaut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACETAC_08650 (ligA)
DNA repair and recombination proteins [BR:
aaut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACETAC_08650 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACETAC_08650 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACETAC_08650 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACETAC_08650 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH
BRCT_2
RNA_pol_A_CTD
HHH_3
HHH_8
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QSZ26929
UniProt:
A0A975AUY7
LinkDB
All DBs
Position
complement(1774264..1776240)
Genome browser
AA seq
658 aa
AA seq
DB search
MSPEEKIKELKDKINYHNYRYYVLDSPEISDYEYDMMMKELIELEEKYPELKTPDSPTQR
VGGEPLKFFEPFTHKVPMLSLANAFSIAELKDFDRRVRSAVGDVEYVVELKIDGLSVELI
YEEGIFTVGSTRGDGFVGENVTSNLKTIKSIPLKLKDNLNLIVRGEVFMPKAAFERLNAR
RLKEGKSLFANTRNAAAGSLRQLDPKITAKRDLDIFVFNLEYIEGVNLKTHIEALDFLKE
QGFKVSPYLIKCQNIDEAIKAIEYLNTVRANLPFDTDGAAIKVNQLDKRDLLGATAKDPR
WAIAFKYPAEKQKTKVKDIIVQVGRTGALTPTAIFEPVKIAGTVVSRATLHNEDYIKNKD
IRIGDTVIIQKAGEIIPEVVEVVKEERTGKERVFTMPDRCPECGALAVRLPGEAVRRCIG
LNCPAQVRRGILHFASKDAMDIDGMGDAVVAQLLDNHLIHNIADLYYLKYDDLVKLERMG
DKSAKNLLNAIEESKKRDLNRLIYGLGIKLVGSKAAKLLAEHFKTMDNLIKASFEELTDI
PEIGPKIANSIIAFFKEKQNLKILDMLKAAGINMEKYQEKKAGNIFEGKTFVLTGTLKIT
RDEAKKLIEDLGGKVTSSVSRKTSYVVVGSEPGSKFQKAKELGVKIINEKEFENMLNQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgaagaaaaaataaaagaattaaaagacaagattaattatcacaattatagg
tattatgtattggatagtccggagatatccgattacgaatatgatatgatgatgaaggaa
cttattgagcttgaagaaaaatatcctgagttaaagacaccggattcacccacacagaga
gtagggggagaacccctcaaattctttgaaccatttacacataaagtaccgatgttaagc
cttgcaaatgctttttcaattgctgaacttaaagattttgatagaagggtacggtctgct
gtaggtgatgtagagtatgtggttgagctgaaaattgatgggctttcagtagaattaata
tacgaagaagggatttttacggtcggctccacaagaggtgacggatttgtgggagaaaat
gtaacatcaaatctaaagaccattaaatccattcctttaaagcttaaggataatctaaac
cttatagtcagaggagaagtttttatgcctaaggcagcctttgaaaggctcaatgcaagg
aggttaaaagagggaaaaagtctatttgcaaacaccagaaatgcggcagccggttctttg
agacagttggatcctaaaataacagcaaaaagagatttggatattttcgtgtttaatttg
gagtatatagagggtgtgaatttaaaaacacatatagaagccttagatttcttaaaggaa
caaggatttaaggtaagtccgtatcttattaaatgtcaaaatatagatgaagccataaaa
gcaatagaatatttaaatacggtaagggcaaaccttccttttgatacggatggtgctgct
atcaaggtaaatcaattggataaaagagatttattaggggctaccgcaaaagatccaaga
tgggcaattgccttcaaatatcctgcagagaagcaaaagaccaaggttaaagatataata
gtacaggttggcaggacaggtgctctaacccctactgcaatatttgaaccggttaaaata
gcgggtacggttgttagtcgcgctacactccataatgaggattacataaaaaacaaagat
ataaggataggcgatacggtaataattcaaaaggctggtgaaataatacctgaggttgtt
gaggttgtaaaagaggaaagaaccggtaaagaaagggtattcacaatgcctgatagatgt
ccggaatgcggtgcacttgcggtaaggcttcccggtgaagctgtgaggagatgtattggg
cttaattgtcctgcacaggtaaggcgcggtattttacattttgcatcaaaggatgccatg
gatattgatgggatgggggatgctgttgtagcgcagcttcttgataatcatcttatacat
aatattgccgacctgtattatttgaaatatgatgacttagttaagcttgaaaggatgggt
gataagtcggcaaagaatcttttgaatgctattgaagaaagtaaaaaaagggacttaaac
agattgatttacgggcttggaattaaacttgtaggaagtaaagcggcaaaattgcttgca
gagcattttaaaacgatggacaatcttataaaagcaagttttgaagaattaacagatata
cctgagattggtcctaaaatagcgaacagcattatagccttttttaaagaaaaacaaaat
cttaaaatattagatatgctgaaagcagccgggataaacatggaaaaatatcaggagaaa
aaagccggcaatatatttgaaggcaagacttttgttttgacaggaacattaaaaattaca
agggatgaagcaaaaaagcttattgaagatttgggaggtaaggtgacgagttctgtaagc
agaaaaacctcatatgtggttgtaggctcagaaccgggttctaaatttcaaaaagctaag
gaactaggggttaaaataattaatgaaaaggaatttgaaaacatgctgaatcagtga
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