Paracidovorax citrulli: Aave_0288
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Entry
Aave_0288 CDS
T00451
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aav
Paracidovorax citrulli
Pathway
aav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Aave_0288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aav03400
]
Aave_0288
Enzymes [BR:
aav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Aave_0288
DNA repair and recombination proteins [BR:
aav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Aave_0288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABM30895
UniProt:
A1TIV7
LinkDB
All DBs
Position
complement(320103..320897)
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AA seq
264 aa
AA seq
DB search
MTSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADIEGRFETLAGLKGHFHYATK
KGYSGVGIYTRHEPSDVRVGYGSTEFDAEGRYVEARFDTPSRKLSIISAYFPSGSSGPER
QLAKFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPEEREWMT
KLLHKTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPAIAALAR
TESIYKQQKFSDHAPITVGYELAI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagcctgaacctcaacggcatccgctccgccgcctcgaagggcgtggaggcctgg
atcgccgagacgcggccggattgtatttgcgtgcaggagatcaaggcgcagtccgccgac
atcgaaggccgtttcgagaccctggcgggcctcaaggggcatttccactacgcgaccaag
aagggctattcgggcgtgggcatctacacccgccacgagccgagcgacgtgcgcgtgggc
tacggctccaccgagttcgacgccgagggccgctacgtggaagcccgcttcgacacgcct
tcgcgcaagctgtcgatcatcagcgcgtattttccgagcggctcgtcggggccggagcgc
cagctcgcgaaattccgcttcctggcggaattccacgtgcacctgatgcgcgtgaaggaa
gagcgcgaattcatcctctgcggcgacgtcaacatcgcccaccagcagatcgacctgaag
aactggcgcagcaaccagaagaacagcggcttcctgcccgaagagcgcgagtggatgaca
aagttgttgcacaagaccgacccgggcggcggcctcgtggacgtgtaccgcctgctgcag
cccgacaccaccgagacggcctacacctggtggagcaaccgcgggcaggcctatgcgaac
aacgtgggctggcggctggactaccacctcgccaccccggcgatcgcggccctggcgcgc
accgagtccatctacaagcagcagaagttctcggaccacgcgccgatcacggtgggctac
gagctggcgatctga
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