Alteromonas stellipolaris R10SW13: AVL56_08960
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Entry
AVL56_08960 CDS
T04403
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVL56_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaw03400
]
AVL56_08960
DNA repair and recombination proteins [BR:
aaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL56_08960
RecFOR pathway proteins
AVL56_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
HHH_3
IMS_HHH
HHH_2
DUF3173
PG_binding_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AMJ94415
LinkDB
All DBs
Position
complement(2085043..2085663)
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AA seq
206 aa
AA seq
DB search
MIGRIRGILAEKQPPEILVDANGVGYEIHMPMTSFYQLPAVGEEVVVYTHFVVREDAQLL
FGFADKMERGLFRELIKANGVGPKLGLTILSGMSAGQFLSAVQNADVSALVSLPGIGKKT
AERLVVELKDRLAKFGKVQSIAIPPPSGDLLNNNTLVEVNDTREDAQSALVALGYKPAQA
SKLIDSVYKEGMESESLIREALKAAI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgattggacgtattcgcggtatattggccgaaaagcagcccccagaaattttggtagat
gcaaacggggtaggctatgaaattcatatgcctatgaccagtttctatcaactaccagct
gtgggtgaagaagtcgttgtttatacccatttcgtagtgcgagaagacgcgcaattactg
ttcggctttgctgataaaatggagcgaggcttgttccgagaactaataaaagccaatggg
gttggtcctaaactaggcctaactatattatcgggcatgtcagcaggtcagtttttgtct
gcggttcaaaatgcggacgtttctgcattagtgagcttgccgggcattggcaagaaaacc
gcagaaaggttagttgttgagttaaaagacagattagcgaagttcggcaaagtacaaagt
attgctattccaccgccaagtggcgacttacttaataacaataccctggtggaagtaaac
gacacacgagaagatgcccagagtgcgctggtggcactaggttataagccagctcaggca
agcaaacttatcgatagcgtttacaaagaaggcatggaaagcgagtcgcttattcgtgaa
gccctaaaagccgctatttga
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