Croceibacterium atlanticum: WYH_00182
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Entry
WYH_00182 CDS
T03925
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aay
Croceibacterium atlanticum
Pathway
aay03420
Nucleotide excision repair
aay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WYH_00182 (pcrA_1)
03430 Mismatch repair
WYH_00182 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aay03400
]
WYH_00182 (pcrA_1)
Enzymes [BR:
aay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WYH_00182 (pcrA_1)
DNA repair and recombination proteins [BR:
aay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WYH_00182 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
WYH_00182 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
EcoEI_R_C
DUF2067
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKH41247
UniProt:
A0A0F7KQ39
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All DBs
Position
complement(170445..172724)
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AA seq
759 aa
AA seq
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MTPPEAAPAWLDGLNPPQKEAVLTTDGPVLMLAGAGTGKTAALTARLAYLIRSRQAWPSE
ILCVTFTNKAAREMRHRVGQLIGEAVEGMPWLGTFHSICAKMLRRHAELVGLESNYTIID
PDDQQRLLKQLIADQKLDEKRWPARQLAGLIDRWKNRGLNPEDLDRLENESYANGRGQEM
YRLYQDRLKSLNACDFGDLLLHMLNIFRRDRSVLAQYQQRFKYVMVDEYQDTNAVQYLWL
RLLAQERKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIRLEQNYRSTPQILAAA
SGLIAANSERLGKTLWTELPEGQKLRIVGVWDAPEEARRVGEEIERLEREGAPLEQVAIL
VRAQYQTREFEDRFIQIGLNYRIVGGFRFYERAEIRDALAYLRVIAQPQDDLAFERIYNQ
PKRGLGAKTLEKMHAHARRQGLPLAAAALDLADTDELPARARGTIGALMGDFLRWREMAE
KVTPSELLRTVLEETGYDAMLKADRSTESAGRAENLVELARAMEEYETLGDFLEHVSLVM
DNDAADDEEKITIMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLASLEEERRLAYV
AITRARRRCTIFHAANRRIYGQWTSSIPSRFIEELPDEHVEVESTMSGGASLWRANWSEQ
EDPFAHVSRDRPERARSRGPGWQRALSTGYDSTPKRLKEPGRSAASFAAKPRGDIAIGAR
VFHDKFGYGTVTDQEGNKLEIEFENSGTKRVIDSFVKLA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgactcccccggaagctgcccccgcctggctcgacggcctgaatccgccgcaaaaggaa
gccgtgctgaccacggatggccccgtgctcatgctggccggtgcgggcacggggaaaacc
gcggcgctgactgcgcggctggcctatctgatccgatcccgccaggcatggccgagcgag
atcctgtgcgtcaccttcaccaacaaggccgcgcgcgaaatgcgccaccgtgtcggtcaa
ctgatcggggaagcggtggaagggatgccctggctcggcactttccattcgatttgcgcc
aagatgctgcgccgacatgcagaactggtcgggctggaaagcaattacacgatcatcgac
ccggacgatcagcagcgcctgctgaaacaattgatcgcggatcagaaactggatgaaaag
cgctggcccgccaggcagttggccggattgatcgaccgctggaagaatcgcggtctaaat
ccggaagacctcgaccggctggaaaatgaaagttacgccaatggccgcgggcaggagatg
tacaggctctatcaggatcggctgaagagcctgaatgcctgcgatttcggcgatctgctg
ttgcacatgctgaatatcttccgccgcgataggagcgtgctggcgcaatatcagcagcgc
ttcaaatatgtgatggtggacgaatatcaggacaccaatgccgtccagtatctgtggctc
cggctgctggcgcaggaacggaagaatatctgtgtcgtcggggatgatgaccagtcgatc
tattcgtggcgcggggccgaagtggccaatatattgcgcttcgagaaggattttcccggc
gcgaaagtgatccggctggaacagaattatcgctccaccccccagattctcgccgccgcc
tccgggctgatcgccgccaatagcgagcggctgggcaagaccttgtggaccgaactgccg
gaagggcagaaactgcgcatcgtcggcgtgtgggacgcgccggaggaagcgcgccgcgtg
ggtgaggagatcgagcggctggaacgcgaaggcgcaccgctggaacaagtggcgatcctt
gtccgggcccaataccagacccgcgaattcgaagaccgtttcatccagatcggcctcaat
taccgcatcgtcggcggcttccgtttctacgaacgggccgaaatccgcgatgccctggcc
tatctgcgtgtaatcgcccagccgcaggacgatctcgcatttgaaaggatctacaaccag
ccaaagcgcgggctcggggccaagacgctggaaaagatgcatgcccatgcaaggcggcag
ggcctgccgctggcagccgcggcgctggatctggcggatacggacgaactgcccgcccgc
gcgcgcgggacgattggcgcgctgatgggcgatttcctgcgctggcgtgaaatggccgaa
aaagtcactccgtcagaactgctgcgcaccgtgctggaggaaaccggctatgacgcgatg
ctgaaagcggaccgttccaccgaaagcgcgggacgtgcggaaaacctcgtcgaactggcc
cgggcgatggaggaatatgaaacgctgggcgatttcctcgaacatgtcagcctggtcatg
gataatgacgcggccgatgatgaggaaaagatcaccatcatgaccatgcatgcggccaag
gggctggaattcgatcatgtcttcctgcccggctgggaagaaggcgtgtttcccagccag
cgttcgctggatgaaggcgggctggccagcctggaggaagaacgccgccttgcctatgtg
gcgatcacccgcgcgcgccgccgctgcaccatcttccacgcggccaacaggcggatttac
ggccagtggaccagttccatcccgtctcgcttcatagaggaactgcccgacgagcacgtg
gaagtggaaagcacgatgagcgggggtgcatccctgtggcgcgcgaactggagcgagcag
gaagatccctttgcccacgtttcccgcgaccggcccgaacgcgcccggtcgcgcggcccc
ggctggcagcgcgcactcagcacgggatatgattccacgcccaaaaggctgaaggagccg
ggccgcagcgccgccagtttcgccgccaagccacgcggcgacatcgccatcggcgcccgc
gtgttccacgacaagttcggctatggcacagtgaccgatcaggaagggaacaagctggaa
atcgaattcgaaaacagcggcaccaagcgggtgatcgacagtttcgtaaaactcgcctga
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