Candidatus Koribacter versatilis: Acid345_0934
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Entry
Acid345_0934 CDS
T00352
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00350
Tyrosine metabolism
aba00360
Phenylalanine metabolism
aba00380
Tryptophan metabolism
aba01100
Metabolic pathways
aba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Acid345_0934
00360 Phenylalanine metabolism
Acid345_0934
00380 Tryptophan metabolism
Acid345_0934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aba04147
]
Acid345_0934
Enzymes [BR:
aba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Acid345_0934
4.1.1.105 L-tryptophan decarboxylase
Acid345_0934
Exosome [BR:
aba04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Acid345_0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SepSecS
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABF39937
UniProt:
Q1IT63
LinkDB
All DBs
Position
1187429..1188829
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AA seq
466 aa
AA seq
DB search
MAPLDLSPADFRALSRKISDFTADYLERLPNLPAFPLNVSGEAVNALFSAEVPIAPMGER
AFDPLADVFALSRPNSPRFFGYVFGSGLPIAALGDFAASVLNQNVTAWRSGPAAVTIERT
VVGWLAEAIGCSGFSGSLTGGGSQANLMALCMAREAKAPANENGAQGGVIYCSDEAHMSM
PKAAMMLGLGQKNVRRIPVNDRFQMDISHLRDAIMRDLREGNRPIAVVASAGTVATGSID
PLPEIADICSEHNLWMHVDGAYGALAAMTVPEKFVGLNRADSLSLDPHKWLYQPAGCGCL
LYRDPAAAQRAFSHTEDYARSLSTDPIESFAFFESSMELSRPFRALKIWLSLRYFGLQAF
QQRIAEDLRLARILADSVSAEPQLELLAPVELSAVCFRYVRKNADLDHLNLEILQRIIQR
GKVCISNATIRGQFALRACVVNHRSTEEDVKAVVSEVLHAANEVSG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcccctctcgacctcagccccgcagatttccgcgccctttcccgcaaaatctccgat
ttcaccgccgattacctggaacgtctcccgaatctacctgccttcccgctaaacgtctcc
ggcgaggcggtaaatgctctcttttccgcggaagtcccgatcgcacctatgggcgaacgc
gccttcgatccgctggcggacgtattcgccttgtcgaggccaaactccccgcgtttcttc
ggatacgtcttcggttccggcctcccgatcgccgcgcttggtgacttcgccgcaagcgtt
ttgaaccagaacgtcaccgcctggcgctccggtccagccgccgtgaccatcgaacgcacc
gtcgttggctggctcgccgaagccatcggttgttctgggttttccggcagcctcaccggc
ggaggctcacaagccaacctcatggctctttgcatggcccgcgaagcgaaagcgcccgcc
aacgaaaacggagcccaaggtggagtgatctattgctccgacgaagctcacatgtccatg
ccgaaagccgcgatgatgctcggccttggtcagaagaatgtccgccgtatcccagtgaat
gatcgcttccagatggacatcagtcatctacgtgacgcaatcatgcgtgatctccgggaa
gggaatcgtcccatcgccgttgtcgccagcgctggaaccgttgctaccggcagtatcgat
cctctgcccgagattgccgacatctgctccgaacacaacctctggatgcacgtggacggc
gcctacggcgcactcgctgcaatgacagttcccgaaaaattcgttggactgaatcgtgct
gactcgctctccctcgacccgcataagtggctctaccagcctgcgggttgcggatgtctc
ctctaccgcgatcctgccgccgcgcaacgcgcgttctcgcataccgaagactacgcacgc
tccctttcgactgaccccatcgaaagcttcgcgttcttcgaatcgtccatggaactttcg
cggccgtttcgcgcgttgaagatatggctttcgctccgctacttcgggcttcaggcattc
cagcagcgcatcgccgaagaccttcgccttgcccgcattctcgccgactccgtttccgcc
gagccgcaactcgaacttctcgcccccgttgagctaagcgctgtttgttttcgctatgtg
aggaaaaatgccgatctcgaccacctgaacctcgagattcttcagcgcatcattcaacga
gggaaggtctgcatctcgaacgcaaccattcgtggccagttcgctctccgcgcctgcgtc
gtgaatcatcgcagcacggaggaagacgttaaggctgtcgtaagtgaggtcctacatgct
gcgaatgaagtgagcggatga
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