Candidatus Koribacter versatilis: Acid345_1282
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Entry
Acid345_1282 CDS
T00352
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00350
Tyrosine metabolism
aba00360
Phenylalanine metabolism
aba00380
Tryptophan metabolism
aba01100
Metabolic pathways
aba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Acid345_1282
00360 Phenylalanine metabolism
Acid345_1282
00380 Tryptophan metabolism
Acid345_1282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aba04147
]
Acid345_1282
Enzymes [BR:
aba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Acid345_1282
4.1.1.105 L-tryptophan decarboxylase
Acid345_1282
Exosome [BR:
aba04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Acid345_1282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
SepSecS
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABF40284
UniProt:
Q1IS66
LinkDB
All DBs
Position
complement(1557586..1559019)
Genome browser
AA seq
477 aa
AA seq
DB search
MGFELTRDERQRLGYQLIDRINDFFESLPTRNVQLPANERTFSPLAEPMPELGDDATRVL
DDLTTELIDRGFHVPAANYFGLMNPTPTYMAVLAEALVSALNPQLASLARSQLASKIENE
TVRWIGERVGWNSAFDGTFTSGGNEANFSGLALALAHHFPDAIENGVASIGAQPVVYCSA
EAHHSLDKSVGLLGLGRKALRRIPINDRIQLDPEKLVKEIDNDRSAGYKPFCVVATAGTT
NSGAVDDISALADICEKHNLWLHLDGAYGAAAIFSDKHRDLVRGIERTDSVTIDPHKWLA
MPFAAGVILTRHPQALRDAFEVSTPYMPKLANAAMTDNFKVSTQWSRRMNSLKVYLTLKV
HGRAAYEELIDRQLQLAKVAADWFEQSDLFELAVPQVLPILNFRLKGVPEQDLAAAHTRI
VEEVTRDGQRWISPTMVNGRSVLRMMIISYLTTEEHIRDLQQALVSAARTLPATARS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaacttacacgcgacgaacgacagcgactcggctatcaactcatcgaccgc
atcaacgactttttcgagtcgctgcccacgcgcaacgtccaactcccagccaacgaacgc
accttcagcccgctcgccgagcccatgcccgagctcggcgacgacgccacccgcgttctc
gacgacctcaccaccgagctcattgaccgcggcttccacgttcccgccgctaactacttc
ggcctgatgaatcccacgccgacatacatggcggttctcgcggaagctctcgtctccgcg
ctcaatccgcaactcgcatccctcgcacgttcccaactggccagcaagattgaaaatgaa
accgtccgctggatcggcgaacgcgtcggctggaactccgccttcgacggcaccttcacc
agcggcggcaacgaagccaacttctccggcctcgccctcgccctggcccaccacttcccc
gacgctatcgaaaacggcgtcgcctccatcggcgcgcagcccgtcgtctactgctctgcg
gaagcccatcactcgctcgacaaatcggtcggtctcctcggtctcggacgcaaggcactc
cgccgcattccgatcaacgatcgcatccagcttgatcctgaaaaattagttaaggaaatc
gataacgatcgatctgcgggatacaagcctttctgcgtagtcgccaccgccggtaccacc
aactccggcgccgtggacgacatctctgccctggccgacatctgcgagaagcacaatctc
tggctccatctcgatggtgcctacggtgctgctgccatcttcagcgacaagcatcgcgac
ttggtccgcggcatcgagcgcaccgactccgtgaccatcgatccgcacaagtggctcgcc
atgcccttcgccgccggtgtcatcctcacccgccatcctcaggccttgcgcgatgccttc
gaggtctcgacgccctatatgcccaagcttgccaacgccgccatgaccgacaacttcaag
gtcagcacgcagtggtcgcgccgcatgaactcgctcaaggtctacctcacgctcaaagtt
cacggccgcgccgcctacgaagagctcatcgaccgtcaacttcagctcgcgaaagtcgca
gccgactggttcgaacaatccgatctcttcgaactcgccgtgccgcaggtattaccgatc
ctcaatttccgcctgaagggcgtgcccgagcaagatctcgccgcagcccacacgcgcatc
gtcgaagaagtcacccgcgacggccagcgctggatctcgcccacgatggtgaatggtcgc
agcgtcttgcgcatgatgatcatcagctacttaacgacggaagaacatattcgcgatctg
cagcaagcgctcgttagtgcggcacgcactctgccggcaactgcaaggagttag
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