Candidatus Koribacter versatilis: Acid345_3017
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Entry
Acid345_3017 CDS
T00352
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
aba
Candidatus Koribacter versatilis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_2
AAA_16
AAA
Mg_chelatase
nSTAND3
NACHT
TsaE
AAA_22
HTH_23
HTH_20
HTH_Tnp_1
AAA_7
MCM
HTH_28
bpMoxR
HTH_30
ResIII
HTH_psq
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABF42018
UniProt:
Q1IM82
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Position
complement(3579612..3580970)
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AA seq
452 aa
AA seq
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MPDRVLLVEDQEALRLAVREYLTARGFDVVEAATCDQARRVFADTHPTAAVLDYHLPDGT
ALDLLPEFKRSDPFVPLIILTAFGSIDLAVGAIKAGADQFLTKPVELAALTVVIQRAIEA
RRDRQKQLAGRPRQEREAVDPFLGSSAQIRKLEEQARRLLEVDTPVLIQGETGAGKTLLA
RWIHANSRRSDEAFVDLNCAGLSRELLETELFGHEKGAFTGAIANKTGLFEVAHRGTVFL
DEIGDVDPQIQPKLLKVLEDKQFRRLGDVRDRKVDVRLLAATHQELSALVRERKFRSDLY
FRISTIPLNVPPLRERTEDIPVLAEKLLQTSTAELGKSGFTLKGDAMDAMQRYAWPGNIR
ELKNVIERAVLLSGSRELSRRDLMFEPQAEGFEGWTTEGSLTLEQLERKYIEWTLQQSGG
KVVEAAKRLDIPKSTLYQKLKQFKIEGGSAEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgacagggtgcttttggtagaagaccaggaggcgctgaggctcgcagtgcgcgag
tacctcactgcccgtggcttcgatgtagttgaggcggccacttgcgatcaggcgcgccgc
gtctttgccgacacccatccaactgctgctgtcctcgactaccacttgccggacggtacg
gcgctcgatcttttgcccgagttcaaacgcagcgatccgttcgtgccgctgatcatcctg
accgcattcggaagtatcgatctcgcggtgggcgcgattaaagcgggcgcggatcagttc
ctcaccaagccagtcgaactggccgcccttaccgtcgtcatccagagggcgattgaagcc
cgacgcgatcgccagaagcagctcgcgggacgaccgcgacaggagagggaagccgtcgat
ccctttcttggatcaagtgcgcaaattcgaaaactcgaagagcaagctcgacgcctgctc
gaagtagataccccggtgctgattcaaggcgagacgggcgcaggcaaaacgctcctcgcg
cgctggattcacgccaactcgcgtcgttccgatgaagccttcgttgacctgaactgcgcc
ggtctttcgcgcgagcttctcgagaccgaattattcggccacgagaaaggcgcgttcacc
ggcgccatcgcgaataagaccggactcttcgaggtcgcgcaccgcggcactgttttcctc
gacgagatcggcgatgtcgatccgcagatccaacctaagctcttgaaggttttggaagac
aagcagtttcggcgtctcggcgatgttcgcgatcgcaaagtggatgtgcgtcttctcgct
gcgacgcaccaggagctttccgctcttgtccgcgagaggaagttccgcagcgatctttac
ttccgcatcagcaccattccactgaatgtccccccgttgcgcgaacgcacggaagacatc
ccggttcttgccgaaaaactcttgcagacctcgaccgcggaactcggcaagtcaggtttc
accttgaaaggagacgccatggatgccatgcagcgttatgcgtggccggggaacatccgc
gaactgaagaacgtgatcgaacgagccgtgctcctgagcggctcgcgggaactctctcgc
cgcgatctcatgttcgagccgcaagcggaaggtttcgagggctggacgaccgaaggcagc
ctgaccctcgaacagctcgagcgcaaatatatcgagtggacgctccagcagagcggcgga
aaagttgtcgaagccgccaagcgacttgatattccaaagagcacgctctaccagaagctg
aaacagttcaagatcgaaggcggaagtgcagaagagtaa
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