Candidatus Koribacter versatilis: Acid345_4592
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Entry
Acid345_4592 CDS
T00352
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba00470
D-Amino acid metabolism
aba00550
Peptidoglycan biosynthesis
aba01100
Metabolic pathways
aba01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Acid345_4592
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Acid345_4592
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Acid345_4592
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aba01011
]
Acid345_4592
Enzymes [BR:
aba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Acid345_4592
Peptidoglycan biosynthesis and degradation proteins [BR:
aba01011
]
Precursor biosynthesis
Amino acid ligase
Acid345_4592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
RimK
ATP-grasp_4
Ins134_P3_kin
Motif
Other DBs
NCBI-ProteinID:
ABF43592
UniProt:
Q1IHQ8
LinkDB
All DBs
Position
complement(5439063..5440244)
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AA seq
393 aa
AA seq
DB search
MAKKIRVGVLFGGRSGEHDVSLLSAASVINAVDKKKFEVVPIGITKEGKWLTASHAESLL
NGKKAEQQLRAGDPEATPGAAVLAKGEAVLVPPVPQSDRSAIVPFETDAAGHSASSIDVD
VIFPVLHGTFGEDGTIQGLFELANIPYVGAGVLGSAAGMDKDIMKALFKNAGLPIVKHMT
VLRSQWQREPKKVKKLVESKLKYPVFVKPANLGSSVGISKAHDSKELGPALDEAAKFDRK
LVIEQGVGGKKKKAREIECSVLGNDEPKASVPGEIVPIKEFYDYAAKYLDEGSALEIPAK
LPKSTQKQVQELAIRAFQAVDGSGLGRVDFLIDPKSNKLYVNEINTMPGFTSISMYPKLW
EASGLKYTDLITRLIELALERHADKQKNQYTKD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaagatccgggtgggcgtgttgtttggtggacgcagcggcgagcacgacgtc
tcgctgctgtcggcggcgtcggtgatcaacgcagtcgataagaagaagttcgaggtcgtt
ccgatcggcatcaccaaagaaggtaagtggctcacggcctcgcatgctgagtcgttgctg
aatggcaagaaagccgagcagcaactgcgcgcgggtgatcccgaggcgacgcccggtgcc
gcggtgctcgcgaagggcgaagctgtgctggtccctccggttccgcagtcagaccgctcg
gcgatcgttccgtttgagaccgatgcggcaggccattccgcttcgtctatcgatgttgac
gtcatcttccccgtgctccacggcaccttcggcgaagacggcaccatccagggactcttc
gaactggcgaacataccctacgtcggcgcaggcgtacttggctcggcggccggcatggac
aaagacatcatgaaggcgctcttcaagaacgctggccttccgatcgtgaagcacatgacc
gtgctgcgcagccagtggcaacgcgagccaaagaaagtgaagaagctggtcgagtcgaaa
ctgaagtatccggtgttcgtaaagccggcaaacctcggctcgtcggtcggcatttccaag
gcgcatgactcgaaagagttagggccggcgctcgatgaggccgcgaaattcgaccgcaag
ctcgtcatcgaacaaggcgtaggcggcaagaaaaagaaagcgcgtgagatcgagtgttcc
gtcctcggcaacgacgagccgaaggcatccgtccctggcgaaatcgtgccgatcaaagaa
ttttacgattatgccgccaagtatctggatgaaggctcggcgctcgaaatccctgcgaag
cttcccaaatccacacagaaacaggtgcaggaactcgcaatccgcgcctttcaggcggtg
gatggcagcggcctgggacgagtggatttcctcatcgatcccaagagcaacaaactttat
gtcaacgagatcaatacgatgccggggttcacttcgatcagcatgtatcccaagttgtgg
gaagcctcgggcctgaaatatacggacctgattacgcgcttgattgagttggcgctggag
cgccacgccgacaaacaaaaaaatcagtacaccaaggactga
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