Acinetobacter baumannii BJAB0868: BJAB0868_03564
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Entry
BJAB0868_03564 CDS
T02728
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abaj
Acinetobacter baumannii BJAB0868
Pathway
abaj03410
Base excision repair
abaj03430
Mismatch repair
abaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJAB0868_03564
03430 Mismatch repair
BJAB0868_03564
03440 Homologous recombination
BJAB0868_03564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abaj03400
]
BJAB0868_03564
DNA repair and recombination proteins [BR:
abaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BJAB0868_03564
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJAB0868_03564
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJAB0868_03564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AGQ12111
LinkDB
All DBs
Position
complement(3750120..3751820)
Genome browser
AA seq
566 aa
AA seq
DB search
MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVA
LMDQAIDEQKKIVIVGDYDADGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAE
LAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHLTTKETPLAEAVVNPNQLGC
EFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLL
ADTMETAYPIAQQLNQLNIDRRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQG
VIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHIRDTIEQVAEQHPELVSHFG
GHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIERL
GPWGQKFPLPQFEGYFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHV
HLVYEIDRNVFNGNVSLQLRIVHLNQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatacaaattaaacaaagacctttattgacacgccctgaacagtttcagggc
gtgcctccgtttattgccgaaattttggcaagacggggcgtacaatccgagcaagaacta
gagttaaagcttaagaatttattggctcctgaactcaaagggttggacgctgctgtagca
ttaatggatcaagccatcgatgagcagaaaaaaatagttattgtgggggactatgacgct
gatggcgcaaccagcactgctttaatgatgctcgtgcttcgcgatatgggagcacaagtc
gactatttggtaccggatcgttttaaatatggctatggacttactcctgccattgctgag
cttgctcatcacacctatcaacccgatctattaattacggtagataatggtatttctagt
catgctggtgttgatgcagcacatgccctaggcatgcaagtgattattactgatcatcac
ttaacgactaaagaaaccccacttgctgaggcggtggtaaacccaaaccaattaggatgt
gagtttccaagtaaggcacttgccggtgttggcgttgctttttatgtacttgccaatttg
gcgagtctacgcaatagacagggtaaaagcacaagtaaagtgactcaatatttagattta
gtcgctttgggaacttatgccgatgttgctgttttggattataacaaccgtattttggtt
gatgccggtgtaaaacgtattcagcaacatcagtgtcgagtgggaatcttagccttactc
gatatcgctggtcgggaagctacttcaatacgtgctcaagatttaggttttgtgctcgga
ccgcgcattaatgctgctggacgtatggagagtatgcgtattgggatcgagtgtttatta
gctgacacgatggaaactgcataccccattgcccagcaattaaatcagttaaatatcgat
cgccgtcaaattgaaggggagatgaagcaacaagctttatctgctttagacagtttacaa
ctctcacaacaagatattcccgcggcgcttgttttgtttgaagaaaactggcaccaaggt
gtcatcgggattgtcgcgggacgtttaaaagaacagtttcatcgcccaacgattgtgttt
gctccagatgaagatggtattcatattaaaggctcagcacgttccattgatggggtgcat
attcgagataccattgaacaagttgccgaacaacatcctgagctggtgagtcattttggt
ggacatgcggcagcggcaggcttaacgattcgtaaagaaaactttgaagcttttaaaacc
gtatttaatgattgtgtagctgctatggatgaatcaatctttcaagcgacattatggacc
gatggtgagctacctgtctctgctttgcaattagataccttaaactggattgagcgatta
ggtccgtggggacaaaaatttccactgcctcaatttgaaggatattttaaagttatcgat
tttcgttggctcaaagagacacatttaaagcttagattagcgatagaccaatatagtttc
gatgctattgcttttaatgcagcaggtcgcttcgagtttgatccgatgcgagaccatgtg
catttggtttatgaaatagaccgtaatgtctttaatggtaatgtgagcttacagctacgc
attgtgcatttaaatcaataa
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