Trichophyton benhamiae: ARB_04383
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Entry
ARB_04383 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ARB_04383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abe03400
]
ARB_04383
Enzymes [BR:
abe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ARB_04383
DNA repair and recombination proteins [BR:
abe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
ARB_04383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
9524612
NCBI-ProteinID:
XP_003017502
UniProt:
D4AJD4
LinkDB
All DBs
AA seq
1020 aa
AA seq
DB search
MEPNPGGAIRETERELDEKPRNHGQTLPFHDLFISLFNPLNDLKKKPAGPPAARRKAGPT
GRNNLSPHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLV
KVMKIDKNSEDGYNLLNWKLPGQRAATAMTGDFAGRCFEVISKRPLRTEVGDMSIADVNS
RLDDLAVASKEDAQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAES
LFNISSSLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDD
PEFWIEEKLDGERMQLHMETNSSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLTRHLK
NAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFDIVY
LNGKPLTRYTLRDRRRALEASVIPVHRRFEIHPYQVGKSASDIEPLLRKVVAEASEGLVL
KNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYYGSGKRGGNISSYLCGLRVDD
THAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDWDPKKPPTEYIELAGGDAQH
ERPDVWIKPDDSIVVCVKAAAVTPSDQFRLGLTVRFPRFKRLRMDKDWQSALSVQEFMDL
KAGAEQEKKEKDFQVDNSRRKKTKRSKKKELTVAGSGEPNVAYVGSKTHIFDGLSFCGLK
IQALEVNYANIFIVVMTESVKPMKKSKADLEQLIKANGGKIYQTNNAAKDTYCIADRRTV
KVASLQKSGLENVIRPCWISDCISQNEHDIGESSILLPLEPRHMFFTKEDQKEEISNNVD
KYDDSFARDTSIAELTEILHKMDAISDISGEERLDIMSDLTLDGDQGSVHSDVEGWLFKN
LTIFFAPCSHLSSVPGEPYVDALSIRQQLARNITIFTGATVTDQQKNNRITHVIVDPSAD
RDPETGKAKNYTTLRSEFATRRAIPHFVTVQWVEECWKEKTLVDEERMYSMPAIALPGLC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaacccaggtggtgccattagggagacggagagggagcttgacgagaaacca
cgtaaccacggacaaacccttccctttcatgacttgttcatatcactctttaaccctctc
aacgatctcaaaaagaagcctgcaggacctcccgcggctcgaaggaaggcaggacctact
gggcgtaacaatctctcaccacacgagttgcgtcgtaatgtgattgaacgcttcatctcg
cgatggcgacaacaagtcggtaatgactttttcccagcattccggcttattgtcccagag
aaagatcgtgatcgtgccatgtatggattaaaagaaaaggccattggcaaattgctagtc
aaagtcatgaagattgacaaaaattctgaagatggttacaatcttctaaactggaaactt
ccaggccaaagggctgcaaccgcaatgacaggtgattttgccggtcgctgctttgaagtc
atctccaagaggcccttgagaacggaggtgggtgatatgtctatagctgatgttaactcc
cggcttgatgatttagctgtcgcttctaaggaggacgcgcagctacccatcctagctgaa
ttttatcggcggatgaacccggaagagatgatgtggttgatcagaattattttacggcaa
atgaaagttggtgctaccgagcgtacattcttcgaaatatggcatccagatgcggaaagt
cttttcaatatttctagtagtcttcgccgagtatgctgggagttatacctaccaagtatt
cgccttgaggcggatgaagctcgtgtcactctaatgcaatgcttccagccgcagctcgct
caatttcaaatgcactcctttcaaaagataattgaaaggatgaggttggctgaagatgat
cctgaattttggattgaagagaagctcgacggcgagcgcatgcagcttcatatggagacg
aacagctctatacccggcggaaagaggtttgaattttggtcaagaaaagctaaagaatac
acgtatctatatggaaatggtttctatgatgataatggatctctaacgagacatttgaaa
aatgcttttgctgatggagttgaaagtattatccttgatggagagatgattacctgggat
ccagaacaagacgcccccgtaccatttggtacgcttaagacggcggccttagcagagcaa
cgaaatccgttttctgcaagtggccatcggcccctattcaggatatttgatatcgtttac
ctcaatggtaaacccctaacgagatacacacttcgggacaggcgtcgagcgctagaagcg
agtgtgattccggttcaccggcgttttgaaattcacccctatcaagttggcaaaagtgcg
agtgatattgaacctctacttcggaaagtagtagcagaggcgtccgagggacttgtcttg
aagaacccgaactcaccatatcgcctcaacgaacgcaatgatgactggatgaaagtgaag
ccagactacatgactgaatttggagaatcgctggattgtattgtagtgggtggctattat
ggctctggtaaaagaggcggaaatatctcaagttacctctgcggcctgagggttgacgat
acgcatgccgaggacgggactaatccgatgaagtgctattccttctgtaaagttggagga
ggatttacagcagcagattatgcaaacattcgtcaccataccgatggcaaatggcatgac
tgggatccaaaaaagccacctactgaatatatagaacttgcaggtggtgatgcacaacat
gaacgacctgatgtctggatcaaacctgatgattcaattgttgtatgtgtcaaggctgca
gctgttacacctagtgatcaatttcgactgggcctaacagttcgattccctcggtttaaa
cggctaaggatggacaaggactggcagagtgcgttgtccgtccaggaatttatggaccta
aaggccggggctgagcaggagaagaaagaaaaggactttcaagtggacaactcccgcagg
aagaagaccaaacggagtaagaagaaagaactcactgttgccggctccggtgagccaaat
gttgcctatgttgggagcaaaactcatatttttgatgggctttcgttctgtgggttaaaa
atacaggctcttgaggtgaattatgctaatatttttatagttgtcatgaccgagtccgtg
aagccaatgaagaaatccaaagctgacctggaacagctgatcaaggcaaacggaggaaag
atataccaaacaaataacgcagcaaaggacacctattgtatcgcagacagaagaaccgta
aaggtggcatcattgcaaaaatctggccttgagaatgtcattcgaccttgctggatttct
gactgcatcagccaaaacgaacacgatatcggagaaagcagcatactgcttcccctagag
ccacgacatatgttcttcactaaagaagatcaaaaggaggaaattagcaataatgtcgac
aaatatgacgacagctttgccagagacaccagtatagcggaacttacagagatactacac
aagatggatgcgatatcagatatatctggagaagaacgactagacattatgtctgatctt
actctagatggagatcaaggctccgtccatagcgatgtagaggggtggctttttaaaaac
ctgacaatattctttgccccctgcagccatctgtccagtgtccccggagagccctatgtc
gatgcgttgtcgatacgtcagcaattggctcgaaacatcaccatttttacgggagccact
gtgacagaccagcagaagaacaatcggatcacccacgttattgttgatccctcagcagat
agggatccggagactggcaaagccaaaaactatactactctgaggtcagagtttgcaact
cgccgcgccattcctcatttcgtgactgttcagtgggttgaagaatgttggaaagaaaag
acactggttgatgaagagcgtatgtattccatgccagccattgctctgccaggactctgc
taa
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integrated database retrieval system
