Azospirillum brasilense Sp7: AMK58_00890
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Entry
AMK58_00890 CDS
T04566
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
abf
Azospirillum brasilense Sp7
Pathway
abf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMK58_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abf03400
]
AMK58_00890
Enzymes [BR:
abf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AMK58_00890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AMK58_00890
DNA repair and recombination proteins [BR:
abf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMK58_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF4213
Motif
Other DBs
NCBI-ProteinID:
ALJ36432
UniProt:
A0A0P0EEZ7
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All DBs
Position
184263..185105
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AA seq
280 aa
AA seq
DB search
MPELPEVETVCRGLAPHLEGRTLVQVLQRRANLRVPFPDSFCERLTGRRVESVRRRAKYI
LVHLDDGTVLIAHLGMSGRMIITPERPAAWGAHDHVVLETDAGTVVTFNDARRFGLMDLA
MAETLAEHPLLRALGPEPLGNAFSGPVLAARLAGRMTSIKAALLDQSVVAGLGNIYVSEA
LFLARLSPTRIAATVTGAKAERLATAIRAVLERAIAAGGSSLRDYRQASGELGYFQHQFS
VYDREGAPCPGCSCDVAKTGGVRRIVQAGRSTFYCPQRQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccgtctgccgtggcctcgccccgcatctggagggg
cggaccctggtccaggtgctccagcgccgcgccaacctgcgcgttccctttccggacagc
ttctgcgagcggctgaccggccgccgtgtcgagtcggtgcgccgccgcgccaaatacatc
ctggtccatctcgacgacgggacggtgctgatcgcccatctcggcatgtcgggccgtatg
atcatcacgccggaacggcccgccgcctggggcgcccacgaccatgtcgtgctggagacc
gacgccggaacggtggtgaccttcaacgacgcgcgccgcttcggcctgatggacctcgcc
atggcggagacgctcgccgagcacccgctgctgcgcgcgctggggccggagccgctgggc
aacgcgttctccggaccggtgttggccgcgcggctggccgggcggatgaccagcatcaag
gccgccctgctggaccagagcgtggtcgccgggctcggcaacatctacgtgtcggaggcg
ctgttcctcgcccgcctcagccccacgcgcatcgccgccacggtgaccggcgccaaggcg
gagcggctggccacggcgatccgcgcggtgctggagcgggccatcgccgcggggggatcc
agcttgcgcgactaccggcaggcgtcgggggagctcggctatttccagcaccagttctcg
gtctacgaccgcgagggcgcgccctgtccgggctgcagctgcgatgtggcgaagaccggg
ggcgtccgccggatcgtccaggcgggccgttcgactttctattgtccgcaacgccagcgt
tga
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