Apilactobacillus bombintestini: D7I45_03970
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Entry
D7I45_03970 CDS
T07159
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7I45_03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_03970
Enzymes [BR:
abom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D7I45_03970
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D7I45_03970
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D7I45_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn-ribbon_8
Ribosomal_S13
zf-dskA_traR
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AYF92693
UniProt:
A0A387ARU5
LinkDB
All DBs
Position
complement(800623..801456)
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AA seq
277 aa
AA seq
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MPELPEVETVRRGLTQLVQGTSIKSIDVLYPKMINVDTKSFQDALTNQTIDRIDRRGKYL
LFRFNNDMTLVSHLRMEGKYDVEPDGTEPSKHTHVIFHLDDNRELRYKDSRKFGRMYLIK
NGEEKTLSGLGTIGPEPTEDDLTFNYMKQVMNKSRGKIKPFLLNQSHIAGLGNIYCDEVL
WMSKIHPETITNTISDDKIETLRQNIIKEIKMAIKGHGTTVHSYSNAYGEAGQFQNHLHV
YGKQGEPCERCGTLFKKIKVAQRGTTYCPNCQKKVAD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtagaaactgttagaagagggttaacacaacttgtgcaagga
acaagtattaaaagtattgatgtgttatatcccaaaatgattaatgtagacactaagtct
tttcaagatgccctaactaatcagactattgatcgtattgatcgtcgtggaaaatatctt
ttatttagatttaataatgatatgacgttagtctcacatttacgaatggaaggtaaatat
gatgtagaacctgatggtacggaaccatcaaaacatacacatgtaatttttcacttggat
gataatcgagaattacgttacaaagatagtcgaaaatttggtcgtatgtatttgattaag
aatggtgaagaaaagacattgtctggtttaggaactattgggcctgaacctaccgaagat
gatttaacttttaactacatgaaacaggttatgaataaatctcgtggtaaaattaaacct
ttcttattaaatcaaagccatattgctggtttaggtaatatctattgtgatgaagtctta
tggatgagtaagattcatcctgaaaccattactaatactattagtgatgataaaatagaa
acattaagacaaaatattattaaagaaataaaaatggcaattaaaggacatggaactacc
gttcattcatattccaatgcatacggagaagctggtcaattccaaaaccatcttcatgta
tatgggaaacaaggtgaaccatgtgaacgttgcggtactttgtttaaaaagataaaggtt
gctcaacgtggtactacttattgtcctaattgccaaaagaaagtggctgactaa
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