Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT110107
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Entry
AGABI1DRAFT110107 CDS
T03136
Symbol
AGABI1DRAFT_110107
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03082
ATP-dependent chromatin remodeling
abp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
03083 Polycomb repressive complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
Enzymes [BR:
abp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
HDAC complexes
Sin3A-HDAC complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
BRAF-HDAC complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
REST complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
SHIP complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
MiDAC complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
Chromatin remodeling factors
NuRD complex
AGABI1DRAFT110107 (AGABI1DRAFT_110107)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
NIL
Motif
Other DBs
NCBI-GeneID:
18822847
NCBI-ProteinID:
XP_007325392
JGI:
Agabi_varbur_1_110107
UniProt:
K5XIX6
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MSERMAAIAGEQKKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYEKMEIFR
AKPATKREMTQFHSDDYVEFLSKITPSNMNSFVKEQHKYNVGDDCPVFDGLFDYCSISAG
GSMEGAARLSRDKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHHRVLYIDI
DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDVGVMKGKYYALNFPLRDGISDE
NYKSVFEPVIRQVMQSYDPSAIVLQCGTDSLSGDKLGCLNLSMRGHADCVRFVKSFNKPL
LLLGGGGYTMRNVSRAWAFETGLAAGFELAPDIPVNEYYEYFGPDYRLDVKSSNVDDMNT
PAYLERVKRIVMENLRQIGGPPSVQMQDRPTMPIDALMDDLNQDEDEEDPNERLPQRLLD
SRIRPDGDYSDSEDEGDGRRDHRSHRERGHSSDSDGKLKFGMGIGILASSSGITHGAGPS
GHTTAVRVLPSSLAIDDEESTETPGETLEMELEETPSLGHENGIANGKSNATPSPSPPKE
REEEDEMVLDNTPGDVTEPPASRPFSPRPVSDDTSTS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgaatggcagccattgcaggcgaacaaaagaaacgtgtctgctattttttt
gattctgatattggcgggtttcattatggcccagggcacccaatgaagcccacgcgtata
cgcatgtgtcactctcttgtaatgaattatgggctgtatgagaaaatggaaatcttccgt
gccaaacccgcaaccaaacgagaaatgacccaatttcactcagatgattatgtggaattt
ctcagcaaaattacgccctcaaacatgaactcatttgtcaaagagcaacacaaatataac
gtcggggatgactgtcctgtatttgacgggctgttcgactactgttccatctctgccggt
ggttccatggagggcgctgcaaggctaagtcgtgacaaatgtgacatagccattaactgg
gcaggaggtttgcatcatgccaagaaaagcgaggccagcggtttttgttatgtcaacgat
attgtactcgggattcttgaattgttacgttatcatcatcgggttttgtatattgatatt
gatgtacaccacggcgatggtgtggaagaagcattttacaccaccgatcgcgtcatgact
gtcagttttcacaagtacggggagtatttccctggtacgggtgagttgcgggatgtcggg
gttatgaaaggaaaatattacgctttaaactttcctcttcgtgatggcatttcggatgaa
aattacaagtctgtttttgagcctgtaattcgacaagtaatgcaatcttatgacccgtca
gctattgtactgcaatgtggtacagattctctgtctggagacaaactcgggtgcctgaac
ttgtccatgcgcgggcatgcagattgcgtacgatttgttaaatcgttcaacaagccgcta
ttacttctcggaggtggcgggtacaccatgcgcaacgtcagtcgtgcatgggccttcgaa
acaggactcgcagctggttttgagcttgcgcctgatattcccgtaaatgagtactacgag
tattttggcccggactataggctcgacgtcaagtcctccaacgtggatgacatgaataca
ccagcatatcttgagcgtgtcaagcgaattgtgatggagaatcttcgacaaatcggtggc
cctcccagtgttcaaatgcaggaccggcctactatgccaatcgatgccctcatggatgac
cttaatcaagatgaagacgaggaagacccgaatgaaaggctaccacagcggcttcttgat
tcacgaattcgaccagatggcgactactcagactcggaagatgaaggggacggccgacgc
gatcatagaagccaccgtgaacgaggacacagtagtgacagtgacggtaaactcaaattc
gggatgggtattggaatcctcgcatcaagttcaggaatcactcatggtgcgggtccgagt
gggcatactactgctgtccgagtccttccatcgagtctcgcgatagacgatgaggaatcg
acggagactccaggtgaaactttggaaatggagttggaagaaacaccttcattgggtcac
gagaatggtatagctaatgggaaatcaaatgcgacaccttccccgtcaccaccaaaagag
agggaagaggaagacgagatggtcctagataataccccaggtgatgttaccgaacctcct
gcttcgagaccgttctctcctcgccccgtttccgatgacacctctacctcgtag
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integrated database retrieval system
