Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT129598
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Entry
AGABI1DRAFT129598 CDS
T03136
Symbol
AGABI1DRAFT_129598
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT129598 (AGABI1DRAFT_129598)
03015 mRNA surveillance pathway
AGABI1DRAFT129598 (AGABI1DRAFT_129598)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT129598 (AGABI1DRAFT_129598)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AGABI1DRAFT129598 (AGABI1DRAFT_129598)
mRNA cycle factors
P-body specific factors
AGABI1DRAFT129598 (AGABI1DRAFT_129598)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18827042
NCBI-ProteinID:
XP_007331132
JGI:
Agabi_varbur_1_129598
UniProt:
K5WSU6
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MSTAIPSSPAKSKSKKVKEKEKDRDHERKQLPGERLKIVVRRLPPNLPEDIFWQSVSNWV
TDDTVMWKLYFPGKPKKRMNKENIPSRAYIAFKDSEHLLFFSREYDGHKFVDKAGNESYA
VVEFAPYQKVPGEKKKPDSRNATIEKGQALRVRYAMFSISNAHLDEDYISFVESLNVQSN
AEPVTIETLGAVLSLKASLIYLLTYPPVASTRPASPPKTTPLLEALKAERQAQKDKEAII
RNHPHYKDLMNAPNPHAPRKEEKRKIARAEVPPPSVGKKPKKGAPSPAPSKQIQIQTKPN
ASGSLTGKPNLVPPTKPSGRPGRVRHASKGPTEATPVPPTAPVPSTSPKDITPVANSPHQ
IPPSVPTSTAPPRRGRPVLGLGSRHFEAALNGVGVNGERKRKEKGKEPATATAFAQEPNA
QDKPVPAPVSPRRSRHRKEGPSGNAASPSVIPDANGSSTLTMQQGEGPNVPNIFNVGRGG
RRGGRGGRGRGGPPRGG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcaatcccatcttcacccgcaaaatccaagtcaaagaaagtaaaagaaaag
gaaaaggaccgggaccatgaacgcaagcagttgccaggcgagcgcctcaaaatcgtcgtt
cgtcgcttaccgcccaatcttcctgaggacatcttctggcaaagcgtatccaactgggtt
acagatgacactgtcatgtggaagttgtacttcccaggaaaaccgaagaaacggatgaac
aaggagaatatcccatctcgtgcctatatcgccttcaaggattcagaacatctgctgttt
ttcagccgtgaatacgatggtcacaagtttgttgataaagccgggaatgaatcgtatgcc
gttgtcgagttcgcaccataccaaaaagttccgggagagaagaagaaacccgactctcgc
aatgcgacaattgaaaaaggtcaagccctgcgtgttcgatatgcaatgttctctatctct
aacgcccacctagacgaagattatatttccttcgttgagtcattgaacgtacagtcgaat
gcggaaccagtcacaatcgagaccctgggtgcagttctttctttaaaggcgagtttgata
tatttgttgacctatccaccagtcgcgtccactcgtcctgcctccccaccgaagacaacg
cctcttcttgaggctctcaaggccgagagacaggctcagaaagacaaggaggctattatc
aggaatcaccctcattacaaggacctcatgaatgctccgaacccccacgctcctcggaag
gaagagaagagaaagatcgctcgagccgaagttcctccaccatcggtcggcaagaaaccg
aagaaaggagcgccatcgccagcgccttcaaaacagattcaaattcaaaccaaacccaac
gctagcggaagtttgactggcaaacctaacttggtgccacccactaagccgtcaggtcgg
cctggtcgcgtccggcatgcttcgaaggggcctactgaggctactccggtgccacccact
gcccctgtcccctcaacgtcacccaaggatataaccccagtggctaactctcctcaccaa
ataccaccttctgtgcctacttccacggcacctccacgacgcggaagaccggttctgggc
ctaggttctagacactttgaggccgctctaaacggtgtcggtgtcaacggtgaacgaaag
cgaaaagaaaaggggaaagagcccgccactgctactgcatttgcacaagagcccaatgct
caagataaaccagtaccagcacccgtgtctccaaggaggtcacgtcatcggaaggaaggt
ccatccgggaacgctgcctctccttctgtcattccggacgccaatggttcaagcacactc
acaatgcaacaaggggaaggtcccaatgttccaaacatattcaatgtcggtcgtggtggt
agacgtggaggtagaggcggtagaggaagaggcggtccccctaggggcgggtaa
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integrated database retrieval system
