KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT51454Help
Entry
AGABI1DRAFT51454  CDS       T03136                                 

Gene name
AGABI1DRAFT_51454
Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030  DNA replication
abp03410  Base excision repair
abp03420  Nucleotide excision repair
abp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abp00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    AGABI1DRAFT51454 (AGABI1DRAFT_51454)
   03410 Base excision repair
    AGABI1DRAFT51454 (AGABI1DRAFT_51454)
   03420 Nucleotide excision repair
    AGABI1DRAFT51454 (AGABI1DRAFT_51454)
   03430 Mismatch repair
    AGABI1DRAFT51454 (AGABI1DRAFT_51454)
Enzymes [BR:abp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
    6.5.1.6  DNA ligase (ATP or NAD+)
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
DNA replication proteins [BR:abp03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AGABI1DRAFT51454 (AGABI1DRAFT_51454)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
DNA repair and recombination proteins [BR:abp03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
   NER (nucleotide excision repair)
    Other NER factors
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
   MMR (mismatch exicision repair)
    Other MMR factors
     AGABI1DRAFT51454 (AGABI1DRAFT_51454)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF4746
Motif
Other DBs
NCBI-GeneID: 18829957
NCBI-ProteinID: XP_007325045
JGI: Agabi_varbur_1_51454
UniProt: K5XK36
LinkDB All DBs
Position
Unknown
AA seq 822 aa AA seqDB search
MGRQQTLGKFFEMPKGLKNAPPQQSSLLDMWSKGKRKAVSGPKKEEADEDIVPENNKMDV
NKPGESSSQSEITKIGPPSKRRRIVTSDDDEPSSSVRRTINSPTVGTSPPVSRTSSPQSS
PPPKSRKARIPVRAAVSEAESEAAATSEPSDDDGEEEIERDEQEDNDESIMAVEGAALLR
IKEVDIPGGWKVGQPVPYAALAKTFSLIESTTKRLEKNSYLTSFLLLVIQRSAKGDWNSL
LQTVYLCINRLSPDYEGIELGIGESLLIKAIAESTGRSLAVIKADLKREGDLGLVAMNSK
TSQKTLFKPKPLTLPFVFSHLKDIATTSGHSSQAKKVSIITKLLAACQGLEAKYIIRSLE
GKLRIGNAERSVLVAIANAVVLAEKEASNKNWSNEKLIKRLEESTLRIKSVYSELPSYDK
VIPALLNVGIDGLEEVCKLTPGVPLKPMLAKPTKAIGEVLDRFENQHFTCEYKYDGERAQ
VHKLEDGSVAVFSRNSEDMSKKYPDLVEQLPKCIKETTKSFVLDAEAVAIDRKTGKLMPF
QELSRRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLRKPLSERRKLLLEHFQPIDGEFNF
AKASNSQSVEEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVG
DSLDLVVVGGYYGKGKRTNVYGAFLLACFDPDSEEYQTICKIGTGFSDEILQSHYNELKP
LELEKARGDVNIGGAKPDIWFEPKIVWEVLTADLSLSPIYTAAHGTVDERGISLRFPRFI
RVRDDKHVEDATASEQVAEMYGRQALANRDGKKKGGDDDGFW
NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt
atgggtcgtcagcaaacattgggtaaattctttgaaatgccaaagggtttgaagaatgcc
cctccccagcagtcaagcctgctagacatgtggagcaagggaaagcggaaggctgtcagt
ggacctaagaaggaagaggcggacgaggatatagtgcccgagaacaataaaatggatgta
aataaaccaggcgaaagctcctcgcagagtgaaataaccaaaattggcccaccgtcaaaa
aggcgcagaatagtcacctcggacgacgatgaaccatcttcaagtgttcggcgaactatc
aactctccaactgttgggacctctcctcccgtttccaggacatcttcaccccaatcctca
ccacctccgaaatccagaaaagcgagaatacccgttcgagcagctgtctcggaggctgag
tcggaagcggccgcaacgtccgagccaagtgacgatgatggtgaagaagaaattgagagg
gatgaacaagaagataatgatgagagcattatggctgtagaaggagctgcccttttacga
atcaaagaagttgacatacccggaggatggaaagttgggcagcccgttccttacgcagct
ctggcgaaaacattttccctcatagaaagcaccacaaagcgtttagaaaagaattcatac
cttacatcatttctgttactagtcatacaacgcagcgcaaagggcgattggaattcgctc
cttcaaacagtttacctctgcatcaatcggttatcaccagactatgaaggcattgagctt
ggcattggcgaaagtttgttgataaaagcgatcgcagaatcaactggtcgaagtttggcg
gtgattaaagcagacttgaaacgagaaggtgatttgggacttgtcgcaatgaattcgaaa
actagccagaaaactctttttaaacccaagccactaacccttcctttcgtattctctcat
ctcaaagacattgctactacgagtgggcactcctctcaagcaaagaaggtttcaatcatc
accaaacttctcgcggcatgtcaaggcttggaggccaaatacattatccgtagtctggaa
ggcaaactacgcatcggcaatgccgagcgatcggttctagtcgccattgcgaatgctgtt
gtcctggcagaaaaagaggcatccaacaaaaattggtcaaatgagaagttaatcaaacga
ctggaagaatccactctcagaatcaagtcggtttatagtgaattgccaagctatgacaag
gtcatccctgctcttctcaacgtcggtattgatggtctggaggaagtgtgcaaattgaca
ccaggtgtccctttaaaacctatgctagcgaaacctaccaaggcaattggcgaagtcctt
gatagattcgaaaaccaacatttcacttgcgagtacaaatacgatggagagcgtgcccaa
gtacataaattagaagacggtagtgtcgcggtcttcagtcgaaattctgaagatatgagt
aagaaatatcccgatctcgtggaacaattgcccaagtgcatcaaagaaacgactaaatca
ttcgtgctcgatgcggaggctgttgcaatagaccggaaaacggggaagcttatgcccttc
caggagctaagtcgacggaaacgcaaggacgtcaaagtagaggatatccaagttcgagtg
tgtttgttcgcctttgatttattataccttaatggcgagcccctgctacgcaaacctttg
tcagagaggaggaaacttttacttgaacatttccaacctattgacggagagttcaacttt
gccaaggcgtcgaatagtcaatcagttgaagagatccaagctttccttgaggagagtgtg
aaggacggttgtgaagggttgatggtgaagatgttggatggcgagcctagcttttatgag
cccagtcggcgtagtgtcaactggttgaagctcaaaaaggattatctggccggtgttggg
gattctttggatttggtcgtggttggtggttactatggcaaaggaaaacgaacaaacgtc
tatggagcctttctccttgcgtgttttgacccagactcggaagaataccaaaccatctgc
aagattggaaccgggttcagtgatgagatcctccaatcacattacaacgaactcaaaccg
ctcgaattagaaaaggctcgtggagatgtcaacatcggaggagctaaacccgacatctgg
tttgaaccaaaaattgtgtgggaagtactcactgcggacttgagcttgagtcctatttat
actgccgctcacggaacggtggacgaacgaggcatttcgctgcgatttcctcgctttatc
agagtgcgagatgacaagcatgttgaggatgcaacagcatctgaacaggttgctgagatg
tatgggcgacaagctctcgcgaatagagacgggaagaagaaagggggtgacgacgacgga
ttttggtga

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