Azospirillum baldaniorum Sp245: AZOBR_100398
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Entry
AZOBR_100398 CDS
T02152
Name
(GenBank) putative single-stranded-DNA-specific exonuclease recJ (fragment)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs03410
Base excision repair
abs03430
Mismatch repair
abs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AZOBR_100398
03430 Mismatch repair
AZOBR_100398
03440 Homologous recombination
AZOBR_100398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abs03400
]
AZOBR_100398
DNA repair and recombination proteins [BR:
abs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AZOBR_100398
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AZOBR_100398
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AZOBR_100398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CCC98012
UniProt:
A0A9P1NLY6
LinkDB
All DBs
Position
1658318..1659397
Genome browser
AA seq
359 aa
AA seq
DB search
MEWLDLVALGTVCDVVPLTGLNRALVAQGLKVMARRANPGLSALSDVAGVKEKPDAYHAG
FVLGPRVNAGGRVGASDLGARLLSTDDPMEAMELAQKLEAHNAERRAVEQGVLADAMARL
EEHAEELAELVFVAGEGWHPGVIGIVASRLKERYSRPACVIALEEGADGTVIGKASGRSV
RGVDLGAAVIAARQEGLLMAGGGHRMAAGFTVAGSKLADLQAFLTGRVAEQVAAAPLVPT
LELDGALSVGAANTSLVDRLNQLGPFGTGNAEPRFAVTDARVVRADVVGANHVRCILQGG
DGARLKAIAFRALESEMGKALLMGRGSPFHIAGVLRIDRWNGAEGVQLLIDDAAPSQTM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctcgacctcgtggcgctgggcacggtgtgcgacgtggtgccgctgacgggg
ttgaaccgcgccctggttgcgcaggggctgaaggtgatggcgcggcgcgccaaccccggc
ctgtccgccttgtccgatgtcgccggggtcaaggagaagccggacgcctaccacgccggc
ttcgtgctcggcccgcgggtcaacgccggcgggcgcgtcggcgcgtcggacctcggggcg
cggctgctctccaccgacgaccccatggaggcgatggaactggcccagaagctggaggcc
cacaacgccgagcgccgcgcggtggagcagggcgtgctcgccgacgccatggcccggctg
gaggagcacgccgaggaactggccgagttggtcttcgtggcgggggagggctggcacccc
ggcgtgatcggcatcgtcgccagccgcctgaaggagcgctacagccgccccgcctgcgtc
atcgcgctggaggagggggcggatggcacggtgatcggcaaggcctcgggccgctcggtg
cgcggggtcgatctcggggcggcggtgatcgcggcgcggcaggaagggctgctgatggcc
ggcggcgggcaccgcatggcggccggcttcaccgtggccgggagcaagctggccgacctg
caggccttcctgaccggccgcgtcgccgaacaggtggccgcggccccgctggtgccgacg
ctggaactggacggcgcgctgtccgtgggggcggcgaacacgtccctggttgaccgcctg
aaccagctcggcccgttcggcaccggcaacgcggagccgcgcttcgccgtcaccgacgcc
cgtgtggtgcgggccgacgtggtcggggcgaatcatgtccgctgcatcctgcagggtggc
gacggcgcccggctgaaggccatcgccttccgcgcgctggagagcgagatgggaaaagcc
ctgctgatgggccgcggatcgcccttccacatcgccggtgtcctgcgcatcgaccgctgg
aacggggcggagggagtccagctcctgatcgacgacgccgcaccctcccaaaccatgtga
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