Agaricus bisporus var. bisporus H97: AGABI2DRAFT225055
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Entry
AGABI2DRAFT225055 CDS
T03140
Symbol
AGABI2DRAFT_225055
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
PBAF complex
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
GBAF(ncBAF) complex
AGABI2DRAFT225055 (AGABI2DRAFT_225055)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
COG6_C
TetR_C_41
Motif
Other DBs
NCBI-GeneID:
18085256
NCBI-ProteinID:
XP_006463344
JGI:
Agabi_varbisH97_2_225055
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MDSPKRAGSATPQNDPKRIKLAVNHGATPVDPDNAPGKRNEQDPIQSTDIANLHPENAPT
HDPPPSVRVRQLKDGEEDEPGDVSMADGADDDGDSADDNDDEDPAQLEATRLRLEEQARK
YLAAQTHEIIIPSYSNWFDMSKIHPVERRAVPEFFNSRNRSKTPSIYKDYRDFMINTYRL
RPTEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDPEQRPAALSPPFTGHFRVIL
DTPRGLQSLHPGTRPSVPNATAGGAPANVKAPSATPASLELRSSIYQTTSKSSKALSSAE
ATTLANGASNGTSHTPQHTHTCDVCGADCSQVRYHCLKDKKLEVCAPCYLDGRFPSTLFS
GDFVKLTTAPPGIAGASSANNDWSDQETLLLLEGVEMYDDDWSKVEEHVGTRTAQQCIRR
FLELPIEDPYLQTEGNMGPLRFGRIPFDQADNPIMSVVAFLAGVVNSSVAAEAAKTALKE
LTDGESGKKSEKGEGEKKDEDKMDEDVPSSRQSPPESASSSDPTKISTTTTTTMTSTTTT
THTLPHSQVQRAAHLALSASAKAAQNLATAEDQQIRGTLSNLIKLTLTKLEIKMSQFEEL
EEILEEERRNLESARVALVNERLGLKKMLDTVRGEVVRHQQQQQQQQLAVATGGPSSSAS
QQQQQPGFSQGVINAATNPGMALGMSGQGPIVNEVQSSAMNVEGGEGPVQDGQTLQLS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggactcgccaaaacgcgctggctctgcaactccccagaacgaccccaagcgcatcaag
ctcgccgtcaaccacggcgctacccccgtcgaccccgacaacgcccccgggaagcgcaac
gagcaggaccccatccagtccaccgacatcgcaaacctccaccccgaaaatgccccgacc
cacgaccccccgccgtctgtccgcgtcaggcagctcaaagacggcgaggaggacgaacct
ggtgacgtgtccatggccgacggcgctgacgatgacggcgactcggcggacgacaacgac
gacgaagaccctgcccagctcgaggctacccgtctgcgtctcgaagagcaggcgcgcaag
tatctggccgcccagacccacgaaatcatcatcccaagctattccaattggtttgacatg
tccaaaatccaccccgtcgaaagacgagccgtccccgaatttttcaactcgcgcaaccgt
tcaaagactccgtccatatacaaggactaccgcgactttatgatcaacacctaccgtctc
cgccccacagagtatctcactgtcaccgcctgccgtagaaatctggccggcgacgtctgt
gctatcatgcgcgtacacgcctttctcgagcaatggggcctgatcaactaccagatcgac
cccgagcaacgcccagcagccctttctcctcccttcactggccacttccgcgtcatcctc
gacaccccacgcggcctccagtccctccaccccggcacgcgaccttccgttccaaacgcc
accgctggtggggcacctgccaatgtaaaagcgccttcagccaccccagcctctctcgaa
cttcgttcctccatctaccaaaccacatccaaatcctccaaggccctctcttccgccgaa
gccacgactctcgcaaatggcgcttccaacggcacttcgcatactccacagcacacacat
acgtgtgacgtttgtggtgcagattgttctcaagtccgttatcactgcctaaaagacaaa
aaacttgaagtttgcgccccttgttatcttgatggtcgcttcccatcgacgcttttctct
ggggatttcgtcaaattaacgacagcgccacctggtatcgctggtgcttcttccgcgaac
aacgattggtccgaccaagaaacccttcttctactggaaggtgtcgaaatgtacgatgac
gattggtcaaaagttgaagaacatgtcggcactcgtaccgcacaacagtgtattcgcaga
ttcttggaattaccgatcgaggatccgtatctacaaacggaaggaaatatgggtcctctt
cgattcggcagaataccttttgaccaggcagataatcctattatgagcgttgtggctttc
cttgcgggcgtcgtcaactcgagcgtggctgctgaagctgccaagacggccttgaaagaa
ttgacggatggagaaagtgggaagaagtcggagaaaggtgaaggggagaagaaagacgag
gataagatggacgaggatgtaccttcatctcgtcagagtcctcccgaatctgcttcctct
tctgatcccacaaaaatcagcacaaccacgacgacgacaatgacatccacgacaacgaca
acccacaccctccctcactctcaagttcaaagagcggctcatctcgctctcagcgcttca
gctaaagcagcccaaaatctcgccacagccgaagatcaacaaatccggggcacactgtcc
aacctcatcaaactgactttgacaaagttggaaattaaaatgtcgcaatttgaggaattg
gaggagatattggaggaggagaggaggaatttggagagtgcgagggttgcgttggtgaat
gagaggttggggttgaagaagatgttggatacggttagaggggaggttgttcgacatcaa
caacagcagcagcagcagcaattggctgtggctactggtggaccgtcgtcgtcagcatct
caacaacaacaacaaccggggttttcgcaaggcgtgattaatgctgcgacgaatccgggt
atggcgttggggatgagtggacaaggaccgattgtgaatgaagtacaatcttcggctatg
aatgtagaaggtggtgagggtcctgtacaggatgggcagacgttacagttgagttga
DBGET
integrated database retrieval system
