Acinetobacter calcoaceticus: BUM88_18650
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Entry
BUM88_18650 CDS
T05452
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUM88_18650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_18650
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUM88_18650
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BUM88_18650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
AAA_21
DnaJ_CXXCXGXG
AAA_33
nSTAND3
AAA_25
AAA_23
AAA_24
NACHT
Viral_helicase1
BCA_ABC_TP_C
cobW
Hexapep
Motif
Other DBs
NCBI-ProteinID:
AQZ83453
LinkDB
All DBs
Position
3854912..3857743
Genome browser
AA seq
943 aa
AA seq
DB search
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
YCPEHDLPMVAQTVSEMVDAVKTLEEGTALMLLAPVVRERKGEYSNLFEQLQGQGFVRAR
VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVREDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPKCDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSSEKLIPNPE
LAISEGAIRGWDRQRPYYYSMLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKVDLS
YIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACDGSRLNEISR
NVRVKDKTIAQITKMSIGDAENYYQDLNLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGIHGGVIIGEGSYDEIASNKDSLTGQYLSGSLKIA
IPTQRTQSPRPDEFIKLSGASGHNLKNVDLKIPLGIMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV
GYKGKNISDVLEMTVEDAAEFFNAIPVIHRRLDTLMQVGLGYIRLGQAATTLSGGEAQRV
KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILYELRNKGNTIVVIEHNLDVIKTA
DWVIDLGPEGGSGGGMIIAEGTPEQVADVEISHTGRFLKPMLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtcatatccgtattcgaggcgcacgtacccataatttaaaaaatgtgtct
ctcgatattccacgcgataaatttgtggtaattacggggttatcaggttcaggaaaatct
tctcttgccttcgataccctctatgccgaaggacaacgccgctacgtcgaatcactttcg
gcctatgcccgtcagtttttatcgcaaatggaaaagcctgaagtagactcgattgaaggt
ttatctccagccattgcaattgagcaaaaatctaccagtcataacccacgttcaaccgtg
ggtactattactgaaatttatgactatttacgcttgctctatgcgcgtgtcggtacacct
tactgccctgaacacgacttgccgatggtcgcacaaactgtttctgaaatggtcgatgca
gtaaaaacacttgaagaaggcacagcactgatgttgcttgcccctgtagttcgtgaacgt
aaaggtgaatacagcaacttgttcgaacagctacaaggacaaggttttgttcgtgcgcgt
gtcgatggcgaaatcattgatattgatacgccgcctgaactcgataaaaagaaaaagcac
accattgaagttgttgttgaccgttttaaagtacgcgaagatttaggtaaccgtattgcc
gaatcatttgaaactgcattacgtttgggcggtgatattgcggttttgtcatggatgaat
ggcgaacacccagaccgcgttttttctgcaaaacactcatgtcctaaatgtgatcgagct
gtagcagaacttgagcctcgtttattttcatttaacaacccgtttggtgcctgccctgtt
tgtgatggtttaggtacacgtagtcattttagctctgaaaagctcattccaaatcctgag
cttgcgattagtgaaggtgcaattcgtggttgggatcgtcaacgtccatattattattcg
atgctgcaaaaagttgccgaccattttggtttccaacttgatacaccttggaaccagtta
gataaagatactcaaaagaaatttttacaaggtacgggcaaagaaaaagtcgatttaagt
tatatcgatgaacgtggccgcaaacacacgcgcgtacaaccttttgaaggaattttgccg
caccttgaacgtcgttaccgtgaaactgaaagtaactatgtacgagacgatttagctcaa
tatttatctaatgccgcttgcgatgcctgcgacggttcacgtctcaatgaaatttcacgc
aacgttcgggtcaaagataagaccattgcacaaatcaccaaaatgtcgattggtgatgct
gaaaactattatcaagatctcaatcttgaaggcgctaaaggtgaaatcgcagataaaatc
tttaaagagattcgcgagcgtttacacttcctcgtcagtgtcggcttaaattatctcagt
ctcgctcgttcggcagaaaccttgtctggcggtgaagctcagcgtattcgtcttgcttcg
caaattggtgcaggtttgatgggcgtgatgtatgtactcgatgaaccatctatcggtctg
catcaacgtgataatgatcgcctactacaaaccttaattcgcttacgtgatttgggtaac
accgtgcttgtggttgaacacgatgaagatgcgattcgtgctgcggatcatattattgat
atcggacctggtgcagggattcatggcggtgtcattatcggtgaaggtagctatgacgag
attgcaagcaataaagactctcttacaggtcaatatctttcaggcagcctaaaaattgcg
atacctacacaacgtacccaatcaccacgcccagatgaattcatcaaactttctggtgca
agtggtcataaccttaaaaatgttgatttaaaaattccgctcggcattatgacttgtgtg
actggcgtttcaggttccggtaaatcaacattgattaaccgtactttgcttccattggca
gcaacacaactcaatggtgcaaccacgctgaccgcagaaaagtttgattcgattgatggc
ttacagcatttagataaagtggttgatattgaccaaagtccaattggtcgtaccccacgt
tcaaatcctgccacgtatacgggtctatttacgccaatccgtgagttatttgcgcaaaca
cctgaagccaaagcgcgtggttatagcgcaggtcgtttctcgtttaacgtgaaaggtgga
cgttgtgaagcttgtgaaggcgatggcatgatcaaggtcgcgatgcacttcttacctgat
atgtatgtgccttgtgatgcttgtcatggcaagcgttataaccgtgaaactttagaagtt
ggttataaaggcaagaacatttcagacgtattagaaatgaccgttgaagatgcggctgag
ttctttaatgcaattcctgtgattcatcgtcgtttagatactttaatgcaagtaggcctg
ggatatattcgtttaggtcaagctgcaacgacactttcaggcggtgaagcgcaacgcgtt
aaattagctcgcgagttagcaaaacgtgatacgggtaaaaccttatatatcttggatgag
ccgacgacaggcttacatttccatgatattgccaagctactcgacattttgtacgagcta
cgcaacaagggtaataccattgtggtgattgaacataaccttgatgtgattaaaacagcg
gactgggttatcgacttaggccctgagggtggttcaggcggtgggatgatcattgccgaa
ggcacacctgaacaagtggctgatgttgaaatttctcatactgggcgtttcttgaagccg
atgttgaagtaa
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