Acanthamoeba castellanii: ACA1_070640
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Entry
ACA1_070640 CDS
T02667
Name
(RefSeq) RNA recognition motif domain containing protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_070640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_070640
Spliceosome [BR:
acan03041
]
Common components
Common spliceosomal components
SR proteins
ACA1_070640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
DbpA
RNA_bind
Motif
Other DBs
NCBI-GeneID:
14924433
NCBI-ProteinID:
XP_004352983
UniProt:
L8HE36
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MDRSPERSERGSDRDRDRHSDRDRDRDRERYRERSRERDRDRDRDRDRDRGRREEAVDPE
RAIFVGNLDPYTTTEEVRELFEGKGDIRRVDMKQGYAFVFLENGHHRAVRELDGSLHGRK
RLRVELARGDGLIKKREDERRRDAARRPSETLFVVNFDAISTRARDLEDLFSPYGRIVRI
ELKRNFGFVQFSAVEEATRALEALNGTKMVDRVISVEYVARGSVESREGGEREREAEFRP
SIAHAGANLGVTHHLRRVPPSCACSPSPTSSPKPSTKRDRSPSPPRGGRPSPPRGRSRSR
RRRFDDPYGERDARRDDPYASGGDRGRDSGSRRYDDAPRRFEESSYRH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagtcccgagagaagcgagcgcggttccgaccgcgaccgtgataggcattcc
gatagagatagggacagggacagggaacgttatcgcgagcgcagccgtgagcgggacagg
gaccgcgatcgtgatcgtgatagggaccgcgggcgccgagaggaggccgtcgatcctgag
cgtgccatcttcgtgggcaacctggatccctacaccaccaccgaggaggtgcgcgaattg
ttcgagggcaagggcgacatccgccgcgtggacatgaagcagggctatgcgttcgttttc
ctcgagaatgggcaccacagggccgtgcgcgagctcgacggcagccttcacggtcgcaaa
cgccttcgcgtcgagcttgcccgtggagacggcctcatcaaaaagcgagaagacgagagg
agacgagatgctgcccggcgtcccagcgagaccctgtttgtggtcaactttgatgccatc
tctactcgggcccgcgatttggaggatcttttcagcccctacggacgcatcgtcaggatc
gagttgaagaggaactttggattcgtccagttcagcgctgtcgaggaggccacccgcgcc
ctggaagccctcaacgggaccaagatggtggacagagtcatcagcgtggagtacgtggct
cgcggcagtgtcgagtcaagagaggggggagagagagagagagaggctgaattccgcccc
tcaatcgcccacgccggcgcaaatttgggcgtgacccaccacctacgacgagttccccca
tcgtgcgcttgctcgccatcgcccacttcatcacccaaaccatcaacgaagcgcgaccga
agccccagcccgccccgcggcggacgaccctctcctccccgcggccgctcccgctctcgc
aggcgccgcttcgacgatccctacggcgagagggacgcgcgccgcgatgacccctatgcc
agcggcggggacagaggtcgcgacagcggcagcaggagatacgacgacgcgccccgccgc
ttcgaggagtcctcttaccgccactag
DBGET
integrated database retrieval system
