Acanthamoeba castellanii: ACA1_110320
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Entry
ACA1_110320 CDS
T02667
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_110320
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACA1_110320
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
90S particles
Helicases
ACA1_110320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-GeneID:
14926060
NCBI-ProteinID:
XP_004357174
UniProt:
L8HHF2
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MLRHSLRTAAGSASQNEKLSSDSSTSRSIFDLVFYSATDVVVGSARAQTTPAASLDFFGS
LKKQKVQEKRKREDDEDDEQQSEENDEHTQEKKNGKNNKKNNNKKNKKNNKRAKKDKQAT
KEAPVKDEDGEEEAKEEEDEEEQQQKQEEKKGDYEDERNQVALFGKSEIKNEGGTKKKKK
ATPISSEQQKERERVNNLRHAHKIRVKGGDVPAPITAFAELEASMRAYLLRNIEAAGYTT
PTPIQMQSIPILLHGRELMAIAPTGSGKTAAYVLPILSKLKQPEKVGFRAVIVSPTRELA
QQIYRELRKLSKGKEFRICVLTKANANENSFSSTTRFDILVTTPMRLVHLLRTESLKLDS
VQHLVLDEADKLLDMGFMEQVDEIIAACTNQAVQRSLWSATMSPIVEDLARTFLRDPVHL
TIGTRDAATTTIKQRLEFVGREEGKLLMLRQMITQSKDRAKELFRELIYENLKVDVIHSE
RTQAQRDSIIKNFRSGAIWILICTDLMARGIDFRGVSSVINYDFPQTTQEYIHRIGRTGR
AGRAGESITFFTEEDVVMIRSIANIMKNSGCDVPEWILNIEKAPRSKRKEIARRPIARRH
IETVSTYDLKQGRKLRKEKSKKIKQFKKAAGAGGPAATGEKKN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccacagcttgagaacggcagccggcagtgccagccagaacgagaagttgagc
agcgacagcagcacctcgcgcagcatcttcgatcttgtcttttacagcgccacggacgta
gtggtcgggagcgcgcgagcgcagaccacccctgccgctagcctcgacttttttgggagc
ctcaagaagcagaaggtgcaggagaagcgaaagcgagaggacgatgaagacgacgagcag
caaagcgaagaaaacgatgagcacacgcaagagaagaagaacggcaaaaacaacaagaag
aacaacaacaagaagaacaagaagaacaacaagagggcgaagaaggacaagcaggccaca
aaggaggccccggtgaaggacgaagacggagaggaggaggccaaggaagaggaagacgag
gaggagcagcagcagaagcaggaagagaagaagggggactacgaggacgagcgcaaccag
gtggcgctgttcggcaagagcgaaatcaagaacgagggcggcaccaagaaaaagaagaag
gccacccccatctccagcgagcagcagaaggagcgggagagggtcaacaacctgcgccat
gcgcacaagatccgagtcaagggcggggacgtgccggcgcccatcacggctttcgcagag
ctggaggcgagcatgcgtgcgtacctgctgcgcaacatcgaggcggcgggctacaccacc
ccgacgcccatccagatgcagtccatccccatcctcctccacgggcgcgagctcatggcc
atcgcccccaccggctcgggtaagacggcggcgtacgtgctgccgatactgagcaagctc
aagcagccggagaaggtgggcttccgggcggtgatcgtgtcgcccacgcgcgagctggcg
cagcagatctatcgcgagctgcgcaagctgtccaagggcaaggagttccgcatctgcgtg
ctcaccaaggccaacgccaacgagaacagcttctcgtcgaccacgcgcttcgacatcctg
gtcaccacgcccatgcggctggtccacctgctccgcaccgaatcgctcaagctcgacagc
gtgcagcacctggtgctcgacgaggccgacaagctgctcgacatgggcttcatggagcag
gtcgacgagatcatcgccgcctgcacgaaccaggccgtgcagcgctcgctgtggagcgcc
accatgtcgcccatcgtcgaggacctcgcgcgcacgttcctccgcgacccggtccacctc
accatcggcacccgcgacgccgccaccaccaccatcaagcagcgcctcgaattcgtcggc
cgcgaggagggcaagctcctcatgctccgccagatgatcacccagtcgaaggacagagcc
aaggagctgttccgggagctcatctacgagaacctcaaggtcgacgtcatccactcggag
aggacccaggcccagagggacagcatcatcaagaacttccggtcgggcgccatctggatc
ctcatctgtaccgacctgatggcgcgcggtatcgatttccgcggcgtctcgagcgtcatc
aactacgatttcccccagaccacccaggagtacattcacagaatcggtcgtacgggtcgt
gcgggcagggcgggagagtcgatcaccttcttcaccgaggaggacgtggtgatgatccgc
tccatcgctaacatcatgaagaactccggatgcgacgtgcccgaatggatcctcaacatc
gagaaggccccgcggtcgaagaggaaggagattgcaaggcggccgatcgcgcgtcggcac
atcgagacggtgtccacgtacgatctcaagcaggggcggaagctcaggaaggagaagtcc
aagaagatcaagcagttcaagaaggccgccggagcaggcggccccgccgccaccggcgag
aagaagaactag
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