Acanthamoeba castellanii: ACA1_296720
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Entry
ACA1_296720 CDS
T02667
Name
(RefSeq) histone deacetylase 1, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03082
ATP-dependent chromatin remodeling
acan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
ACA1_296720
03083 Polycomb repressive complex
ACA1_296720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acan03036
]
ACA1_296720
Enzymes [BR:
acan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
ACA1_296720
Chromosome and associated proteins [BR:
acan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
ACA1_296720
HDAC complexes
Sin3A-HDAC complex
ACA1_296720
BRAF-HDAC complex
ACA1_296720
REST complex
ACA1_296720
SHIP complex
ACA1_296720
MiDAC complex
ACA1_296720
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
ACA1_296720
Heterochromatin formation proteins
Other heterochromatin formation proteins
ACA1_296720
Chromatin remodeling factors
NuRD complex
ACA1_296720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
14926624
NCBI-ProteinID:
XP_004368317
UniProt:
L8HK34
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSKQRICYFYDGDVGNYYYGNGHPMKPHRIRMTHNLLLNYGLYKQMKIYRPRHATKQEMA
QFHAEDYVKFLRLITPDNMNEYTKQLQRFNVGEDCPVFDGMYQFCQISSGGSIGGAVKLN
HGESDIAINWAGGLHHAKKSEASGFCYINDIVLAILELLKYHARVLYIDIDIHHGDGVEE
AFYTTDRVMTVSFHKYGEYFPGTGDIRDIGAQKGKYYSVNFPLRDGIDDESYENIFKPII
QKVMDWYRPGAVVLQCGADSLSGDRLGCFNLSLKGHGACVEFVQSFGLPLLVLGGGGYTI
RNVARCWTYETALLLKKDINDALRWRLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagaggatctgctacttctacgatggggatgtgggcaactactactacgga
aacggacacccgatgaagccgcaccgcataaggatgacccacaacctgctcctcaactat
ggcctctacaagcagatgaagatctacaggcccaggcacgccacaaagcaggagatggcg
caattccacgccgaagactacgtcaaattcctaagattgatcactcccgacaacatgaat
gagtacaccaagcaactgcaaagattcaacgtgggcgaagattgtcctgtctttgatgga
atgtatcaattctgccagatctcttctggtggttcaatcggtggcgctgtgaagctcaac
cacggcgagtccgatatcgccatcaactgggctggcggccttcaccacgccaagaagtcg
gaggcctctggcttctgctacatcaacgacatcgtgctggccatcctcgaactgctcaag
taccacgcgagagtcctgtacattgacattgacattcatcacggcgacggtgtcgaagag
gccttctacaccaccgaccgcgtgatgaccgtctccttccacaagtacggagagtacttc
cctggcacaggcgacatcagggatattggagcacagaagggcaagtactattcggtcaac
ttcccgctgagggatggcatcgacgacgagagctacgagaacatcttcaagcccatcatc
cagaaggtgatggactggtaccggccgggagcggtcgtgctccagtgcggcgcggactca
ctatcgggcgatcgtctgggctgcttcaacctctcgctcaagggccacggcgcgtgcgtc
gaatttgtacagagctttgggctgcccctcctagtccttggtggcggcggttacaccatc
cgtaacgtcgctcgttgctggacctacgagactgccctcctcttgaagaaggacatcaat
gacgctctgcgttggcgccttggctga
DBGET
integrated database retrieval system