Acanthamoeba castellanii: ACA1_396250
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Entry
ACA1_396250 CDS
T02667
Name
(RefSeq) NAF1 domain containing protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_396250
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
ACA1_396250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
14923802
NCBI-ProteinID:
XP_004351616
UniProt:
L8HBD1
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MEGDPQQQHTTPVAVGDHSAGGAMDLEDSPAPVPAAVLESAPVPSSSTAAAATGAVMLLD
DLPPAAFAFATATTATAGVEAGAGAPASSFPATPLPSTTTTTTTAPTTPLGSAMDEEPFM
GAAASTSLSTAVSSTPQQQQQHALAAAPPLAAAAAAVPSSAFTSAAAGPPPPQALLHGGG
GGREVMDEEEEDDDEEEEEVVKDDLQAAAMAAEVPAWALSGAVRPVHQHPDALLPHVEEE
DDEDDDDDSDDEEEAAIVGGGGAADDNEERGSSGKGGARLPFEASDIPRTKHELAPQAVE
EEVVIPAEAALELAGAVEGMVEGFLVVAADPARQTLDIDNALCFDDRTPLGRVHEVFGPV
KKPYYAVLNAHVERLRAQGREALLTRGTPVYYVPQASCFVQPTIIYTRGSDASGEHDEEP
PEDELEFSDDEQEALHRRQRKKKLQDKRRQAHAETQEWEGNAEMALRTGAPAHHTSSAPA
GRGRGERGRRRAANRGGYAGGGWSRGPAPPMAHGMPYAPAAAAGGGGHHAPGEYTPLQRP
SHLVDHVMSNPAYGAASHGQQAYLPPQQQLPSLVPYGTPYGHMAYPGAQPMPMPMPMPMP
AAPGQTQGQAQPQAMPLPMPLPMPPQAYPGGPPMYPPGAQASWQNQFYASPHHHNSSS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgacccacagcagcagcacaccaccccggtggcagtcggggaccattccgcc
ggaggagccatggatctcgaggactcgcccgcccccgtccctgcggccgttctggagtcc
gcccccgtaccctcctcctccaccgccgccgccgccacgggcgccgtcatgctgctcgac
gacctcccacccgccgccttcgccttcgccacggccaccacggccacggctggtgtcgag
gctggtgccggtgcccccgcttcctccttccccgccactccactgccgtccaccaccacc
accaccaccacggcgccgacgacgccgctgggctcggccatggatgaggagcccttcatg
ggcgcggcggcgtcgacctccctcagcaccgcggtcagcagcaccccacagcagcagcag
cagcacgccctggcagctgcaccgccactcgcagcggcggcggcggccgtgccctcctcg
gcattcacatcggcagctgccgggccaccaccgcctcaggcgctgctgcacggcggcggc
ggcggccgggaggtgatggacgaagaggaagaagacgacgatgaagaagaagaagaagtg
gtgaaggacgacctgcaggcggcggccatggcggccgaggtgcccgcgtgggcgctctcc
ggggcggtgcgtccggtgcaccagcaccccgacgcgctcctgccccacgtcgaagaggag
gacgacgaggacgatgacgacgactcggacgacgaagaggaggcggccatcgtgggaggc
ggcggcgcggccgacgacaacgaggagcgcggcagctcgggcaagggcggcgcacggctg
cccttcgaggccagcgacatcccccgcaccaagcacgaactcgcgccgcaggcggtggag
gaggaggtggtgatcccggccgaggccgcgctggagctggcgggcgcggtggagggcatg
gtggagggcttcctcgtggtggcggccgaccccgcgcggcagacgctcgacatcgacaac
gcgctgtgcttcgacgaccgcacgccgctgggccgggtccacgaggtgttcggcccggtc
aagaagccctactacgcggtgctcaacgcccacgtcgagcggctccgggcgcagggccgc
gaggccctcctgacccgcggcacgccggtctactacgtgcctcaggcctcctgcttcgtg
cagccgaccatcatctacacccgcggctccgacgcctctggcgaacacgacgaggagccg
cccgaggacgagctggagttctccgatgacgagcaggaggccctccaccgccgacagcgg
aagaagaagctgcaggacaagcggcggcaggcgcacgcagagacgcaggaatgggagggc
aacgcggagatggccctccgcactggcgcgccggcccaccacacctcgtctgcccccgca
gggcgaggaaggggcgagcgcggccggcgaagggccgccaacaggggcggctacgcgggc
ggcggctggtctcgtggaccggcgccgcccatggcccatggcatgccctacgctcccgcg
gcagcggcgggcggtggtggccaccacgcgcccggggagtacacgccgctgcagcgtccg
tcgcatttggtggaccacgtcatgagcaacccggcctacggcgcggcgagtcacgggcag
caggcctacttgccgccgcagcagcagctgccctcgctcgtgccgtacgggacgccctac
ggccacatggcctaccccggggcacagcccatgccgatgccgatgccgatgccgatgccc
gccgcaccgggccagacccagggccaggcgcagccccaggccatgccgctgccgatgccc
ctcccgatgccgccgcaggcctaccccggaggcccgcccatgtacccgccgggcgcgcag
gcctcctggcagaaccagttctacgcgtcgccccaccaccacaactcctcctcgtga
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