Antrostomus carolinensis (chuck-will's-widow): 104523360
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Entry
104523360 CDS
T08541
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104523360 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_CA
EGF_2
EGF_3
Motif
Other DBs
NCBI-GeneID:
104523360
NCBI-ProteinID:
XP_010164212
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MVPVSLCPTGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFTRRHCATXHCRPNP
CHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCPSGF
SGIHCENNTPDCTESSCFNGGTCVDGINTFTCICPPGFTGSYCEHNINECDSKPCLNGGT
CQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNLYRCECNSGWTGLYCD
VPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQ
NGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQG
VHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFVGERCEGDVNECLSNP
CDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGGTCAVASNTGRGFICK
CPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTGPECQYPASSPCTSNP
CYNGGTCEFFGDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDIIPPKIEEKCEIAVCA
GYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYFNDGKCDAQCNNPGCL
YDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLDCANNMPEKLADGTLV
VVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYYGNEEELKKHYIKRST
EDWSDMSSAVINKVKSSFYSRSGRRQKRELDQMDIRGSIVYLEIDNRQCIQSSSQCFQSA
TDVAAFLGALASLGNLNIPYKIEAVKSETAEPTTNSQLYPMYVVVVAVVLLASVGVGVLV
SRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASDGTLMDDNQNEWGDE
ETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPTPPQGEIDADCMDVN
VRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLHNQTDRTGETALHLA
ARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG
TTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNNVEAAVVLLKNGANKD
MQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE
YNLVRSPPLHNGPLGAPTLSPPLCSPNSYISNLKPAVQGKKARKPSTKGLSCNGKDAKDL
KARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSPFQQSPSMPLNHLPG
MPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPSTAMSNAPMNFSVGGA
AGLNGQCDWLTRLQNGLVQNQYNPMRGNMQPGAHQQTQNLQHGMMTSLHNGLPSTSLSQM
MSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQQNMQPQQQPQQPQQQPQQQQQQPQQHH
NPSSNTSSHIAQNFLGTELSQPDMQPVSSSTMAVHTILPQDSQMLPTSLPSSLAQPMTTT
QFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSP
PTSMQSQMGHIPEAFK
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggtccctgtctcactgtgtcccacaggtcagacctgcgagatcgacatcaacgagtgt
gtgaagagcccctgccgcaacggggccacgtgccagaacaccaacgggagctaccgctgc
gcctgcaggaccggcttcactcgccgccactgtgcaaccnngcactgcaggcccaatcca
tgccacaatggtggctcctgctccgatggcatcggtacgttcttctgtgagtgcctggct
ggcttccgtgggcccaagtgtgaggaggacatcaacgagtgtgccagcaacccctgcaaa
aacggtgccaactgcaccgactgcgtcaacagctacacctgcacttgcccctctggcttc
agtggcatccactgcgagaacaacacacctgactgcacagagagctcctgcttcaatggt
gggacctgcgtggatggcatcaacaccttcacctgcatctgtccacctggcttcacgggc
agctactgcgagcacaacattaatgagtgcgactccaagccgtgcctgaatgggggcaca
tgtcaggacagctatgggacatacaagtgtacctgtccccagggatacaccgggctcaac
tgccagaacctggtgagatggtgtgactcctctccttgcaaaaatggaggcaagtgctgg
cagaccaacaacctgtaccgctgcgagtgcaacagcggatggacagggctctactgtgat
gtccccagtgtctcttgcgaggtggctgctaagcagcaaggtatcgatgtcgcacatctc
tgcaggaattcagggctctgcgtggataccggcaacactcacttctgccgctgccaggcc
ggctacactggcagctactgtgaggagcaggtggacgagtgctccccaaatccctgccag
aacggagccacctgcacggactacctgggaggttactcctgcgagtgtgtggctggttat
catggagttaactgctccgaggagatcaatgagtgcttgtcccacccatgccagaatgga
ggaacctgcatcgatctcatcaatacctacaaatgctcctgccccagaggaactcaaggg
gtgcactgtgagatcaatgtggatgactgcagccctttctttgatcctgtcaccctgggg
cccaagtgctttaacaatggcaagtgcacggatcgggtaggtggctacagctgcatctgc
ccacctggctttgtaggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccc
tgcgatgcccgcggcacccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgc
cgacctggctacgcaggccgtcgctgtgacactgtggtggatggctgtaaaggcaaaccc
tgcaggaatggtggaacgtgcgcggttgccagcaacactggccgcggcttcatctgcaaa
tgccctccgggcttcgtgggtgccacctgcgagaacgactcccgcacctgtggaaacctg
cactgcctgaatggtggcacctgcatctccatccacaagagctccaagtgcatgtgcgca
ccagccttcacgggtcctgagtgccagtacccggccagcagcccctgcacatccaacccc
tgctacaacgggggcacctgcgagttcttcggcgatgcctccccctactatcggtgcaac
tgcccggccaacttcaacggcctcaactgccacatcctcgactttgatttccaaggtggg
attggacaggatatcatcccacccaaaattgaggagaagtgtgagattgcagtttgtgcg
gggtatgctggcaacaagatctgcgatgggaaatgcaacaaccatgcctgcggctgggat
gggggcgactgctccctcaatttcaacgacccctggaagaactgctcccagtctctgcag
tgctggaagtacttcaacgatggcaagtgcgatgctcagtgcaataaccctggctgcctc
tacgatggatttgactgccagaagtatgaagggcagtgcaaccctctctatgatcagtac
tgcaaagatcacttctcggatggtcactgtgaccagggctgcaataattttgagtgtgaa
tgggatggtctggactgtgcaaacaacatgccagagaagcttgctgatggcacgctggtg
gtggtggtcctcatcactcccgagaacctgaagaacaactctttcaacttcctgcgggag
ctgagccgcgtgctgcacaccaacgtggtcttcaagaagaaccccaagggagaatatatg
atcttcccatactatggcaatgaggaggagctgaaaaagcattacatcaagaggtcaaca
gaggactggtcggatatgtctagtgctgtcatcaacaaagtaaagagcagcttctactcc
aggtctggcagaaggcagaagagagagctcgatcagatggacatcagaggatccatcgtc
tacttggaaattgataaccgccagtgcatccagtcgtcttcccagtgcttccagagtgca
accgatgtggcggcgttcctgggtgccttggcctcccttggcaacctgaacataccctat
aaaatagaagctgttaaaagtgaaacagctgagcccacgacgaactcccagctgtatcct
atgtacgtggtggtggttgcagtggtcttgcttgcttccgttggagtgggagtattggtg
tctcgtaagcggcgcagggagcatgggcagctttggttcccagaaggcttcaaagtgaca
gagtcgagcaagaagaagcggcgagaaccacttggagaggattctgttggactgaaaccc
ctcaaaaatgcttcagatggcacactgatggatgacaaccaaaatgagtggggtgatgag
gagaccttggacaccaagaaattcaggtttgaggagcaggcgatgctgcccgacacggac
gatcagacagatcacaggcagtggacccaacagcacctggatgccgccgacctgcgcatc
tcctccatggcacctactccaccgcagggagaaatcgatgcagactgtatggatgtcaac
gtcagaggtcctgatggcttcacccccctcatgatcgcctcgtgcagcggaggagggctg
gagactggcaatagcgaagaggaagacgatgctcccgccgtcatctcagattttatttac
caaggcgccagtttacacaaccagactgaccgcaccggcgagacagcgcttcacctggca
gccaggtactcccgatccgatgctgccaagcgcctgctggaagccagtgctgatgcaaac
atccaggataacatgggcaggacacccctccacgctgctgtctctgccgatgcccaaggt
gtcttccagatcctgattaggaacagggcaaccgatctcgacgcccgaatgcacgacggg
accactcccctgatcttggccgctcgcttggcagtggagggtatgctggacgatctcatc
aactgccatgcagacgtcaatgctgtggatgatctaggcaagtcagcactgcactgggca
gctgctgtgaataatgttgaagctgcagtagtcctcctgaagaatggtgccaataaggat
atgcagaacaataaggaggagacaccgctgttcctcgcagccagagaagggagctacgaa
accgccaaggtcctgctggaccattttgccaaccgcgacatcacagaccacatggaccgg
ctcccacgggacattgcccaggagcgcatgcaccacgatatcgtgaggctgctggacgag
tacaacctggtgcggagcccaccactgcacaacggcccactgggtgctcccacgctgtcc
ccaccgctctgctctcccaacagctacatcagcaacctgaaacctgccgtccagggcaag
aaggccagaaagccaagtaccaagggcctgagctgcaacggcaaggatgccaaagacctc
aaagcccggaggaaaaagtcacaagatggaaaaggatgtctgcttgacaactccagcgtg
ttgtctccagtggactccctggagtcgccccatgggtacctgtcggatgttgcctctcct
ccactgatgacctctccatttcagcagtccccttccatgcctctgaatcatctgccaggc
atgcctgatgcccacatgagcatcaatcacctcaacatggcggggaagcaggatatggcc
atgggaaactccagcaggatggccttcgattcagtgccgccgcgtctctctcacctccct
gtctccagccccagcacagcgatgagcaatgccccgatgaatttctccgtcggcggagcg
gccggtctgaacgggcagtgcgactggctcaccaggctgcagaacggcttggttcagaat
cagtacaacccgatgagaggcaacatgcaaccaggggcgcatcagcagacgcaaaacctt
caacacggcatgatgacctccctgcacaacggcttgcccagcacaagcttgtcgcagatg
atgagctaccaggccatgcccaacacccggctggcttcccagcctcacctgatgcagagc
cagcagctccagcagatgcagcagcaacagctccagcagcaaaacatgcagccgcagcaa
cagccgcagcaaccccagcagcagccgcagcagcagcagcagcagccgcagcaacatcac
aaccccagctccaacacgagcagccacatcgcccaaaatttccttggtaccgagctgagc
cagcccgacatgcagccggtgagcagcagtaccatggcagtccacaccatcctgcctcaa
gattcccagatgctgcccacgtctctgccatcctccctcgcccagcccatgaccaccaca
cagtttctaactccaccttcccagcacagttattcctcccccttggacaacacccccagc
caccagctccaggtgcccgaccaccctttcctaacgccgtctccagagtcaccggaccag
tggtccagctcgtctcctcactccaacgtgtccgactggtccgagggcatctccagccct
cccacgagtatgcagtcacagatgggacacatccccgaagccttcaagtaa
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integrated database retrieval system