Achromobacter sp. B7: DVB37_08135
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Entry
DVB37_08135 CDS
T05703
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
achb
Achromobacter sp. B7
Pathway
achb03030
DNA replication
achb03430
Mismatch repair
achb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVB37_08135
03430 Mismatch repair
DVB37_08135
03440 Homologous recombination
DVB37_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achb03032
]
DVB37_08135
03400 DNA repair and recombination proteins [BR:
achb03400
]
DVB37_08135
Enzymes [BR:
achb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVB37_08135
DNA replication proteins [BR:
achb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVB37_08135
DNA repair and recombination proteins [BR:
achb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVB37_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AYD63895
LinkDB
All DBs
Position
1800466..1803957
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVTNPTPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGVKPIAGCDVWLSNDDDPGKPFRLLLLVRNHQGYLNLCELLSKAFLTNQGKGRAE
IRREWLQGQQGLIALSGGRMGDVGQALDAGNAVSALALARQWAHLFPGSYYIELQRAGMD
GDEAYTQAAMRLAGEAGLPVVATHPVQFLDEYEFQAHEARVCIAEGEILANPRRVRRFTK
EQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVTLDDYLVQL
SEEGLEKRMAFLFPDEAEREAKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWSLER
TLKDEPAFKDRYEQEEEVRALVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALELDDP
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRAAVDYFHNDLEGTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVKDKYTEKGKPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGPFLNLFDFCRRVGKQAVNRRTIEALIKAGAFDT
IEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSSDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRRIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARAKSLRVKLNGTADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRV
RMADTLLENLNAWTKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtaacaaacccgaccccttttgtgcacctgcgcgtccactccgagttc
tcggtggtggacggtattgttcgcatccccgacctgatcaagcgcgtggccaagctgggc
cagcccgccgtggcgctgaccgatctgtccaacctttttggcctgatcaagttctataaa
ggcgcgcgcggcgcgggggtcaaacccatcgccggctgtgacgtctggttaagcaacgac
gatgacccgggcaagccattccggctgttgttgctggtgcgcaaccatcagggttacctg
aatctttgcgagctgctgtccaaggcgtttctgacgaaccagggcaaggggcgtgccgaa
atccgccgcgaatggctgcaaggccagcagggcctgatcgcgctgtcgggcggccgcatg
ggcgacgtgggccaggcgctggacgccggcaacgccgtgtcggcgctggcgctggcgcgc
cagtgggcgcacctgtttccgggcagctactacattgaattgcagcgcgcgggcatggac
ggcgacgaagcctacacgcaggccgccatgcgcctggcgggcgaagccgggctgcccgtg
gtggccacccacccggtgcaattcctggacgaatatgaattccaggcgcacgaggcccgc
gtctgcatcgccgaaggcgaaatcctggccaacccgcgccgcgtgcgccggttcaccaaa
gagcaatatttgctcagttcggaagaaatggcgcggcgctttgccgacgtgccctcggcg
ctggccaacacggttgaaatcgccaagcgctgcaacctgagcctggtgctgggcaagccg
cgcctgcccaacttccccacgcccgacggcgtgacgctggacgactacctggttcagttg
tcggaagagggcctggaaaagcgcatggcgttcctgtttcccgacgaagccgaacgcgaa
gccaagcgcgagcagtactacgagcgcctgcgctgggaatgcaagaccatcatccagatg
gggtttccgggctacttcctgatcgttcaagacttcatcaactggggcaagaacaacggc
gtgcccgtcggacccggccggggctcgggcgcgggttcgttggtggcctacgcgctgggc
atcaccgacctggaccccatccgctatgacttgctgttcgagcgcttcctgaatcccgag
cgggtctccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatt
gactacgtcaaggaaaaatacggccgcgccgccgtcagccagatcgccacgttcggtacg
ctgggcgccaaggccgtggtgcgcgacgccggccgcgtgctggacatgccctatatgttc
tgcgacgggctgtccaaactgatcccgttcaacccgatggatccgtggtccctggaacgc
accctgaaggacgaaccggccttcaaggaccgctacgaacaggaagaggaagtgcgcgcg
ctggtcgatctggccaagccgctggaaggcctgacccgcaacatcggcatgcacgcgggc
ggcgtgttgatcgcgccgggcaagctcacggatttctgcccgctgtattgccagccgggg
caggaaaacagcgccgtctcgcagttcgacaaagacgacgtcgaagccgccggcctggtc
aagttcgactttctgggcctgcgcaacctgaccatcctggattgggccgtgcgctacgtg
cgccagttcaacgaggacaagcgcgacttcgacgtcatggcgctggaactggacgacccg
gccgcctacaagatcctgtgcgacgccaacaccaccgccgtgttccagctggaatcgcgc
ggcatgaaagagctgctgaagaagctgcggccgaacacgttcgaagacattatcgccatg
ctggccctgtatcgtccggggccgctggaatcgggcatggtggacgacttcgtcaaccgc
aagcacggccgtgccgcggtggactacttccacaacgatctggaaggcacgctgaaaagc
acctacggggtcatcgtctaccaagaacaggtgatgctgatctcgcagatcatcggcggc
tattcgctaggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgaattgttcgagcaaggcgccaaggaaaagggccacgacccggac
ctggccgtcaagctgttcgacctgatggaaaagtttgcgggatacggctttaacaagtcg
cactcggcagcctatgcactgatctcgtaccagaccgcgtggctcaaggcttatcacccg
acggagtttttggccgccaccatgtcgtccgatatggacgacacggacaaggtccagatt
ttctgtcgcgacgcccaggacaacggcgttgaagtgttgccgcccgatgtcaatttttcg
ggctaccgcttcgaacccgtcaaggacaagtacaccgaaaaaggcaagccgccgcgcacc
atgcgctacggcctgggcgccgtcaagggcacggggcagggcgcggtcgaagacatcctg
cgcgcgcgcaaggaaggcggcccgttcctgaacctgttcgatttctgccgccgtgtgggc
aagcaggccgtcaaccgccgcactatcgaagcgctgatcaaggccggcgcgttcgacacc
atcgaaccgaaccgcgcggcgatgctggcctcggtgcctacggcgatggaagcggccgaa
caggccgcccgcagcgccaaccaggcatcgctgttcggcgacgacagcagcgacgtggtc
gcgggcgaactggccaaggtcgcgccgtgggacctgcacaagaagctgacggaagaaaaa
tccgcgctgggctactactacagcggccacctgtttgacgcctggcgcgacgaagtgcgc
cgcatcgtgccgatgcagctggcgcgggtggagccgcagcgcgacctgcaatggatgtgc
ggcgtgctggccagcgtgcgggtcatgatgacgcggcgaggcaagatggtgtttgccgtg
ctggatgacggcaccgcgcaggtcgagatctcggtgttcaacgagctctacgaaaagcat
cgcaaccgcttgcgcgaagaccagctggtcatcgtgcaaggcaaggtcagcaacgacgat
tactcaggcggcatgcgcatcgttgccgaacaactgtacgacttgcaactggcccgcgaa
gcacgcgccaaatcgctgcgggtcaagctgaacggcacggcggacgcggcgcgtttgcgc
cagatgctgaacccgttccgcgccgaaccggaaaacggtatcccgggcgtgcccgtcgat
atcgtctataccaagaacaattttctatgcacagtgcggctgggcgaagaatggcgcgtc
cgcatggccgacacgctacttgaaaacctgaacgcctggaccaaacccgatggagttgag
gtgacctattga
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