Aquila chrysaetos chrysaetos (golden eagle): 115333514
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Entry
115333514 CDS
T08023
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04510
Focal adhesion
achc04512
ECM-receptor interaction
achc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115333514 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115333514 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115333514 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achc04147
]
115333514 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
achc00536
]
115333514 (COL4A6)
Exosome [BR:
achc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115333514 (COL4A6)
Glycosaminoglycan binding proteins [BR:
achc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115333514 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115333514
NCBI-ProteinID:
XP_029852396
LinkDB
All DBs
Position
21:complement(19908139..20050062)
Genome browser
AA seq
1706 aa
AA seq
DB search
MGRGCAPAPPAVGRAGVLVLVLLCLGAELASGGGKKSYSGLCGGRDCSAGCKCFPEKGAR
GRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPAGQKGDKGPMGVPGFQGINGIP
GHPGQSGPRGLPGLDGCNGTIGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKG
MKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGE
KGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGMPGFGGVGEKGE
KGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPGYPGLDGVEGMKGELGDIGPPGPPIVIDR
EGVVISGAPGDPGNPGIPGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGE
VGEPGRATIGLPGTPGRDGLPGLPGAPGLPGSPRPSFPPDTILDGRTGAPGEPGQRGLPG
ALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGLRG
PPASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPG
PPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGFPGQAGLP
GPPGITLPCIVPGAYGPPGTPGFPGLPGSKGSKGFPGFPGQPGLHGSKGQPGSPGIIGLQ
GESGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGTKGTPGDVFGAESGALGERGRPG
LPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGKPG
PLGSAGLAGAPGCQGLPGVKGLAGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFG
QDGHPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGGKGNPGAVGLQGQKG
DRGDVGPPGLPVLGLPEQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPIG
SASKERGLHGDPGFSGPPGQPGLPGQKGTHGIIGFPGMPGERGSDGITGTLGFPGPIGLP
GPKGEQGESVGIPGIAGTKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLKGSPGDLGQ
EGPAGIPGNAGLRGIPGPSGPPGQPGPVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGS
PGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGALGFPGPKGLSGDMGPPGPVGLPGLPGT
PGASLPSDIRGRPGDAGHPGTDGISGLPGPPGSQGPPGPASDQGDTGNPGFPGVLGLRGI
KGDVGPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPPGDPGYPGLKGETGHRGLPGRQGA
PGITPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGRDGLPG
SPGIVGDPGPLGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIG
MNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWL
STTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVS
APPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggctgcgcccctgctccgccggccgtggggcgcgcaggggtgctggtgctg
gtgctcctctgcctgggcgcggagctggcgagcgggggtggaaagaagtcttacagtgga
ctgtgtgggggccgtgattgcagtgctggatgcaaatgttttccagagaagggtgcgcgg
ggtcgaccaggaccgattgggcttcaaggaccgataggtgcacctggatttactggccca
gaaggtttgccaggagcaaaaggtgagagaggagcagtgggcccccctggaccagctgga
cagaaaggtgacaagggcccaatgggagttccaggatttcaaggcatcaatgggatccca
ggtcaccctgggcagtctggacctagaggtctgcctggcctcgatggctgcaatggtacc
attgggagtcctggcgtttctggatcagatggatttcctggcctacctgggctgcctggt
cgtcctggcccaaaaggccttaagggagaacctgtttttgcccaaggcagtcttaaagga
atgaagggagaaaatggtcttcctggattggatggaatttctggccccaaaggttttccg
ggtccaataggttcagcaggccctataggattaccaggtttgcagggtccaatgggtccc
cctgggccaccaggtccaaaaggtaacatgggattaggctttcaaggagaaaaaggagaa
aagggtgatgtagggctgcctggccctccaggtcccccaccatctactggaatactggaa
ttcatgggatttccaaaagggaagcaaggagaaaagggtgagccaggccctcaaggattc
cctggagacaagggtttgcctggcatgccgggctttggaggtgttggagaaaaaggagaa
aaaggtgttcctggcttaccgggtggcaggggtcttttgggactggatggatctgatggg
attccagggagaaagggtcatccaggtattccaggctatccaggactggatggagtcgaa
ggcatgaagggtgaattaggtgacattggtcccccaggccctcctatcgttattgacagg
gaaggtgtagtcatttcaggtgccccaggtgaccctggaaacccaggaatacctggtcct
ccaggagatgaagggatcagtggtttaccaggccttccaggagctccagggtttccaggc
ctggagagagatggaatgggccctggagggtctccaggtattccaggtgtgaagggtgaa
gtcggagaaccaggaagagcaacgattggattaccaggcactcccggcagagatggttta
ccgggtctgccaggagcaccaggattgcctggttcaccacgcccttcattccccccagac
accatcctggatggaaggactggggccccaggggagcctggacagagagggctgccagga
gctttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgatggaggagtt
acaagagctggtctaaaaggcatctcaggtccaccaggtccatcgggaagccccggtgtg
cctgggattaagggcattggtggagacccaggcactgtgggtgcaccaggactgcgaggc
cctccggcttcagctggtcagcaaggtcttccaggccttaagggagaaaaaggggattcg
tcctatgcaacaggcagaggtgctcgtggggaccgtggtgcgacagcacccagaggacct
tcaggcatcccgggaacccctggcagggatggacttccaggcttgccaggcccaccaggc
cctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccaggattacctggc
tccaagggccatcgtggagaaactggttctcctggtgttggatatccaggtcctagtgga
gttcgtgggccgccaggtgacccaggaatggatgggtttccaggacaagcaggtcttcca
ggccctccaggtatcaccttgccctgcatagttcctggagcatatgggcccccagggacc
cccggctttccaggattgccaggttctaaaggcagcaaaggctttcctggctttccaggc
caacctggattacatgggtcaaaaggacagccagggtctccaggaataataggcttgcaa
ggggaatctggcttccctgggcctcgaggagagcaagggtcacaaggacttccaggactg
gatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctggaacaaaagga
actcctggagatgtatttggtgctgagagtggagccctgggagagcgtggccgacctgga
ctcccaggtgataaagggcttacaggtgatcttggatttccaggaccaaaagggttagat
ggaagaccaggcctcctaggtattaaaggtgaacagggtaatccaggatattcgggtgtc
cctggattgcggggacctcctggtcctggaggtccttttggcattaagggaaaaccagga
cccttggggtcagctggccttgcaggagcaccaggctgtcaaggacttcctggagtcaaa
ggcttggctggggacgtaggtccacaaggccctgctggtatgaaaggcttcccaggtctt
gatggtgctccaggatctcctggggaaagaggattcttagggccacctgggccttttggt
caagatggacatccgggtttttctgggccaaaaggcgagaaagggtcttctggcctgctt
ggtttccctggcatgccaggcctgcctggtgtccctggggtgaatgggtttaaaggaact
cctggcacagctggaggaaaagggaaccctggagctgtgggactccaaggtcaaaaaggt
gacagaggtgatgtaggtccacctggtcttcctgttcttgggcttccagaacaggcattg
caattcaaaggagacaaaggagatcctggattagctggacttggaggattccctggacct
agaggtgataaaggaatcccaggaagccgtgggcagcctggtctccctggtccaattggg
tcagcaagcaaagagagaggtcttcatggtgacccaggcttctctggtccacctggacag
cctgggctgccaggacagaagggtacacatggtatcataggatttccaggaatgccagga
gagaggggttcagatggtatcacaggaacacttggattcccaggacctattggcctccct
ggtccaaagggtgagcagggagagtctgttggcattcctggcattgctggaacaaaagga
gagcgaggggacccagggttcccaggagagagagggagagaaggactcaagggtgaacca
ggctacccaggaaacactggggtgaatggactcaaaggcagcccgggagatcttggccaa
gaaggaccagcaggaatccctggaaatgctgggctgagaggaatccctgggccatcagga
cctccagggcagccaggacctgttggattccctggagctcgtggaacagcaggacctaaa
gggtttcatggattcccaggtttaaatggtctgaatggcttgccaggcacaaaagggtct
cctggaacaccaggtctgagtgaagctggactgaaaggccctgcaggtctcccaggtccg
aagggtgaagaaggttctccaggcttgggtagaggagctctaggattccctggaccaaaa
ggcttatcaggagacatgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cctggagcttctcttccttctgatatacgtgggagacctggggatgctggccatccagga
actgatgggatttcaggtctcccaggtcctccaggatcacaagggccccctggcccagct
tctgaccaaggtgacacaggcaatccaggtttccctggtgttcttggcttgcgaggcatt
aagggtgatgtgggacccactggtccaattggactccctggagcgtctggattcaaaggt
ataagaggtgagcctggccttatggggatgccaggtaaagatgggcctccgggggatcct
ggttaccctgggctgaagggtgaaacgggccatcgaggtctccctggccgacaaggggct
ccaggtataaccccacagccagaagaagtcacagcccctgcaggcttacctggtctgcca
ggaattgatggtgtccctggctttgatggagatcctggattccagggcccagctggaaaa
ccaggtacaaaaggtctgccaggaagatctggtttgaaaggacgtgatggtttacctgga
tcacctggcatagttggggatccaggacctttgggtgccccaggaccacaaggatttgaa
ggtgttgctggaaagccgggctcgcttggtttgccgggaatgcctggtcggagcgtgggt
gttggatacactttagtgaagcacagtcagtcagaccaaatcccaccttgtcccatagga
atgaataagctctgggacggctacagcttattgtacgtggaggggcaggaaaagtcacac
aaccaggatcttggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatt
tactgcaacatcaatgaagtgtgctactacgccagccgaaatgacaagtcctactggctc
tccaccactgctcctatccccatgatgccggtggacagcgttcagatcccacagtacatc
agtcgttgctcagtatgtgaagcgccttcccaggctgtggctgtgcacagccaggacatc
accatcccacagtgtccccttggttggcgcagcctgtggatcggatactccttccttatg
catactgcggctggtgcagaaggtggaggtcagtcccttgtctcacctggttcttgcctg
gaggatttccgtgccactccattcattgaatgcaacggtgctaggggaacatgccattac
tttgcaaacaaatacagcttctggctgacgaccgttgaacagtcgcagcagtttgtcagt
gctcctccctcagaaactctgaaagcagggcagcttcgaacaagggtcagccgttgccaa
gtgtgcatgaagaacttgtag
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