Acanthisitta chloris (rifleman): 103803451
Help
Entry
103803451 CDS
T08456
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103803451 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achl03021
]
103803451 (PBRM1)
03036 Chromosome and associated proteins [BR:
achl03036
]
103803451 (PBRM1)
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103803451 (PBRM1)
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
103803451 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
103803451
NCBI-ProteinID:
XP_009074255
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFDDAHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD
YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL
FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDDDEEGHDNQANSELSSPG
YLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
TYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRIR
TASNLAASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGDRLSAITMALQYGSESDEDA
ALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFHLPSKKKYP
DYYQQIKTPISLQQIRTKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQ
VMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIRKQRMKILYNAVLEAREPGT
GRRLCDLFTVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYAAEEAMIEDMKLMFRNAR
HYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKLKLSRKSGISPKKSKYMTPM
QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKKPVDMEKIRSHMMANKY
QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLI
QELIHNLFVSVMSHQDDEGRCYSDSLAEIPXXXXXXXXPLTFDIIRKNVENNRYRRLDLF
QENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN
DVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSSLHRTYSQDCSFKNSMYHV
GDYVYVEPAEANLQPHIVCIERLWEDSAEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFK
LCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTD
KVEEEKHTESLEESKVGENILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCVVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEMGEEEGESTPKSVKGS
TKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGM
ISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPM
VGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPAAQPVMQQPTTPMFVSPPPKTQRLLH
SEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADAL
WRLRDLMLRDTLNIRQAYNIENV
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagaggcgaagagctacctcaccttccagcagcgtcagcggaggagacttc
gatgatgcccatcactccaccaacataccaggcccaagcaggaagaggaggagactttcc
aatctcccaacggtagatcctattgctgtctgccatgagctctacaacaccatcagagat
tacaaagatgaacagggcagactcctgtgtgagctgttcattagggcaccaaaacgaaga
aatcagccagattattatgaagtggtttctcagccaattgatttgatgaaaatccaacag
aagctcaagatggaggaatatgatgatgtgaacgtgctgactgctgattttcagcttctc
tttaacaacgcaaaggcttactataagcctgactctccagaatacaaagctgcctgcaag
ctgtgggagctgtatctgcgcacaaaaaatgagtttgttcagaaaggtgatgctgaggag
gaagatgatgatgaggaaggacatgacaatcaagcaaattctgaattatcatcgccaggc
tacctgaaggagattcttgaacagctccttgaagctgtagctgttgccacaaacccatca
ggacgcctcataagtgaactgtttcagaaacttccatctaaagtgcaatatccagattat
tatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaatgga
acttacaaaagcattcatgcaatggccaaggacatagaccttctggcaaagaatgccaaa
acctacaatgagcctggatcacaagtgttcaaggatgcaaatgcaattaaaaagatcttt
aatatgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatcagg
actgcatcaaatttggctgcttccaagctgacaggtccttcctcacagggtaaaggcagt
gttggggatgagagaaattcttctaacaaatattatcgtaacaagagatcagcccagggg
gatcgtttatcagctataaccatggcattgcagtatggatccgaaagtgatgaggatgca
gctttggctgctgctgctcgttatgaagagggagaatctgaagctgagagcattacttcc
ttcatggacacttctaatcctctttatcagctttatgacacagtgagaagttgccggaac
aatcagggccagctcatatctgaaccttttttccacttgccctccaagaagaagtatcct
gattattatcagcaaattaaaacaccaatttccttgcagcagatcagaaccaagctgaag
aaccatgaatatgaaactttagatcagttggaggctgatctgaatttgatgtttgaaaat
gccaagcggtacaatgttcccaattctgccatctataaaagagtactgaaaatgcagcag
gttatgcaggcaaagaagaaggagctcgctaggagagatgatattgaggatggggacagt
atgatttcttctgctacatctgatactggaagctcaaaaaggaaaagtaaaaagaatatc
cggaagcagcgaatgaagatcttatacaatgcagttctggaagctcgagagccaggcaca
ggcaggaggctctgtgatctgttcacagttaagccatccaaaaaggactatccagactat
tataaaattatcttggagccaatggacttgaaaatgatcgaacacaacatccgcaacgac
aagtacgcggcggaggaagccatgatcgaagacatgaagctcatgttccgaaacgcgagg
cattacaacgaggaaggctcccaggtgtacaatgatgcccatatgctggaaaagatcctt
aaagaaaaaaggaaagaactgggacccttggctgaagatgatgatgttgcatcccctaaa
ctaaagctaagcaggaaaagtgggatttctcctaaaaaatccaagtacatgactccaatg
cagcagaagctgaatgaggtgtacgaggccgttaagaactacacggacaagcgaggcagg
cggctcagcgccatcttcctgcggctgccgtcccgctccgagctccccgactactatgtc
accattaaaaaacctgtggacatggaaaagatcaggagccatatgatggcaaataaatac
caggatatcgactccatggtggaggactttgtgatgatgttcaataacgcttgcacttac
aacgagccggagtctttgatttataaggatgctcttgtcctgcataaggttttgcttgag
actcggagggaaatagaaggagatgaggattctcatgtgcccaatgtcactttgctaatt
caggaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggcaga
tgttacagtgattccttagctgagattcctnnnnnnnnnnnnnnnnnnnnnncccccctg
acttttgatattatccgaaaaaatgttgaaaataatcgctacagaagactggacttgttc
caggagaatatgtttgaggtactggagagggcaaggagaatgaacagaactgattcagag
atttatgaggatgccgtcgaacttcagcagttctttattaaaattcgagatgaactgtgt
aagaatggagagattcttctgtcacctgctctcagctataccaccaagcatcttcacaat
gatgtagaaaaagaaaagaaggaaaagctgcccaaagaaatagaggaggacaaactcaaa
agggaggaggagaagagagaagctgaaaagagtgaagactcctcaggatcagctgggctg
tcaagcttacatcggacctacagccaggattgcagcttcaagaacagcatgtaccatgtg
ggagattatgtgtatgtggagcctgcagaagccaacttgcagcctcacatcgtctgtatc
gagaggctgtgggaagactcagctgaaaaagaggtttttaaaagcgactattacaataaa
gttcctgttagcaaaattttaggcaaatgtgtggtcatgtttgtcaaggaatattttaaa
ttgtgtcctgaaaacttcagagatgaggatgtctatgtctgtgagtcacgctattctgca
aagacaaaatctttcaaaaagatcaagctgtggactatgcctgtcagctctgtgagattt
gtgccacgagatgtgcccctgcctgtggtccgcgttgcttctgtgtttgctaatacagac
aaagtggaggaggagaaacacactgaaagcttagaggagagtaaggtgggagaaaacatc
cttcaccttgaaaaggacaaagaagatgttccagtagaaatgtccaacggagaacctggt
tgccattactttgaacagctctgctacaatgatatgtggcttaaggttggggattgtgtc
ttcataaaatcacatgggttggtgcgacctcgagtaggaagaattgaaaagatgtgggtg
cgagatggagctgcatatttctttggtccaatcttcattcaccctgaagaaactgaacat
gaaccaactaagatgttctacaagaaggaagtgtttttgagtaacttggaagagacgtgt
ccaatgacttgcattttgggaaagtgtgtcgtcctgtcattcaaagacttcctgtgctgc
agaccaacagaaatctcggaaaatgatgttttcctctgtgagagtcgatacaacgagagc
gacaaacagatgaagaaattcaaagggctgaagaggttttcactctctgccaaagttgta
gatgacgagatatactattttagaaaacccatagttcctcagaaggaaccatctccacta
ctggaaaagaagattcagcagctggaagcgaaatttgctgagttggaaggaggtgatgag
gacatggaagagatgggagaagaggaaggtgagtccactcccaagtctgttaagggcagc
accaagaaggagggatcaaaaaggaagatcaacatgagtgggtacatcttatttagcagc
gagatgagagctgtgattaaagctcagcacccagactactcctttggagagctcagcagg
cttgtaggaactgaatggagaaacttggaagcaacaaagaaagcagaatatgaaggcatg
ataagtggctatccaccggtgctgccacctttgcagggcccagttgatggcattgttagc
atgggcagcatgcagccacttcacccaggggtgcccccaccccaccaacttccgccaggt
atgccaggcatcccgggcatcccaccacccggtgttataggccaaaatgtgtcccccatg
gtaggcactccagcacccggagcaagcccctttggacagcagataggaatccttggccca
ccaggacagcaggcaccccctccctaccccggccagagcccagcagctcagccagtcatg
cagcagcccacaactcccatgttcgtctcccctccaccaaagacacagaggctcctccat
tccgaagcctacctgaaatatattgaggggcttagtgctgaatcaaacagtatcagcaag
tgggaccagacccttgcagcacgaagacgagacgtgcacttatcaaaggaacaggagagc
cgactcccttcgcactggctgaagagcaagggtgctcacaccaccatggccgacgcgctg
tggcgcctgcgagacttgatgctccgcgacacgctcaacatccgccaggcgtacaacatc
gagaacgtgtag
DBGET
integrated database retrieval system
