Acanthisitta chloris (rifleman): 103809217
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Entry
103809217 CDS
T08456
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
achl03037
]
103809217 (RP1L1)
04812 Cytoskeleton proteins [BR:
achl04812
]
103809217 (RP1L1)
Cilium and associated proteins [BR:
achl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103809217 (RP1L1)
Cytoskeleton proteins [BR:
achl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
103809217 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
103809217
NCBI-ProteinID:
XP_009080287
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
IFKQEKWHRFLLCPPPYNYEPPLPSVARASTLTKPPLPSVARASTLTKVPPAKKITFFKS
GDPQFAGVKMAINQRSFKSFNALMDDLSHRVPLPFGVRTITTPRGIHCISELDQLEDGGC
YLCSDKKYVKPISITSGAHRPAPPRNGRPSSTMRRVTQESKLEDYSTPFTHHGPRIPKKI
TLVKNGESGFRRSIILNRRNARSFKTLLDEITEILQFPVKKLYTADGKKIDSMQALLHCP
NVLVCVGREPFKPVSMENLRKHSVEKLPNLPPRSNGNSGNENNEMNFGLKAKKSVIHPRS
ASSNRSMRFSLSSEKSYPNGLAASPDNSAPFSNGCSHAKAGDLVHSLVNDDIEKRVHVNK
DGSLSVEMKVRFRLLNDETLQWSTQIKKSNLMNCLPCEESGVEEDSGLDPIQKMNPEASS
EADDSLYPCDIDSYMSKLEESECDEAHCHSCGKKHQDYDIWKNPMHTTQREEPNVRSTWR
TRSSCSSTSSRRRVVHKKMTSVDSLHTTSSEEFSEHIVRESSSYSETIQNRMAYRSVKKC
TCRSDLSTGASNGEDQQEHTRTSTGNSQRHSSLGAMSHSSCENNLDTQDDVDDHEISKII
SQNEEENCLEASSVKCFKDDVEEVESSRVGSVMSRSSLHSRQSKKNVCEETSSVGRSMSS
SSLQKATQEDNTRSSTPANSVHSKSSNCTTPKAKSEQDDHSDDNPVISSFSSESCPKKEA
EEVEAEQEENEVNEVSSVSANTKPSQSVRGESSEGERCSTQGSHHARASDRNSKKSDSDE
NIPCNASCSSRGSRKSKRSHVHLDTQSEVSVSSLESTPNKKKSSLHADDVRSGSRTSNYS
KSSCETKKKSVGGPMSHQSGSLHSYISSASEAEATAGPVEEKSSKTATEMNDQNNKEIDD
SGNKKGEEEVEDTGMQEEEKDLMPSALPNTSPEEVVQEWLSKIPSETLLMKDEMQDDGVE
ECTEATTEVSQCTNAEETPEDEKVEEKNGEEAENEVKDEMEEETAEDIVINEEAEECVNQ
GEISEVVSEAVKAEQAECNQSVISSQTNNRRDLPTSVQTSVQIMKALLSSKHETKFDRSN
SLPEVSPTMGRKLSNSANILITCLASLQLLDEESEDPSDNSKALSKSRYTELLNLFQALW
FGCTAERSGPSSGQEASEQAKPTKPMDHTFTHMSSSGVDVCSGSGGSGEECTAGATLVAQ
KTVEFKSAEQVENADTGTELTEMAEAEAEAEAEAEAEEQNKEEEQPSHPSTACSKAKGEE
KAQSAREDSLVQEEENEKDQCSNGEHGQEEGGENETEETSKLAETGEQEEVETGEQEEAE
TGEQKVEAVNDEPPQENPEEEAAQAAITGVTNASDTDGGTELKADLEEHLEKESPGDPEP
KATSTRAGAPLVQQNSVDPDPTWVLRLLKKIEKEFMAHYVNAMNELKIRWNLQDNQQMDE
MILELKEEVSKRIQKSIEKELRKIRSRAGRRMPRPPEEPLTPESKLQTEQRRWRLQTMHK
KSLFGDKNGNQNRLEDTLDLSLNLDTDLALSEALEASLSKQSSEEEYCPCDSCVRKKLAS
KPTRAPVVATNAPVMKAFDLQQILRVKKNDVEETLVAEAAQDTQAPLNGSVEEAAENGDA
NDEGEAQAKETEMESKEEKERQN
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
ttatctttaagcaagagaaatggcacaggttcctgctatgtcccccaccctacaactatg
agccacctcttccctccgtggctcgggcaagcactctcaccaagccacctcttccctccg
tggctcgggcaagcactctcaccaaggtacctccagccaaaaaaataaccttcttcaaga
gtggagatcctcagtttgcaggagtcaagatggccatcaaccagcgaagcttcaagagct
tcaatgcactcatggatgacctctcccatcgggtcccactgccgtttggggtacggacca
tcaccaccccacgaggaatacattgcatcagtgagctggaccagctggaggatggaggat
gctacctgtgctctgacaagaagtatgtgaagcccatcagcatcacttccggggcacaca
ggccagcgcctccgcggaatgggcgaccctccagtaccatgagaagagtaactcaggaga
gcaagcttgaagattattccacacctttcactcaccacggccccagaatacccaagaaaa
tcactctggttaagaacggagaaagtgggtttcggcgctccattatcctgaaccgcagaa
acgcacggagcttcaaaacgctcctggatgagatcacagagatcctgcagttcccagtga
agaagctctacactgctgatgggaagaagattgacagcatgcaggctctgctgcactgcc
ccaatgtgctggtgtgtgtcggccgagagccatttaaacctgtatccatggagaatttga
ggaaacactctgtggagaagctgcccaacctgcctccccgctccaacggcaacagtggca
acgaaaacaatgaaatgaactttggactgaaagccaaaaaaagtgttatccatccacggt
cagcatcgagcaataggtcaatgagattttccttgtcatcagaaaagtcgtatcccaatg
gccttgctgcctcaccagataacagtgcacctttctccaatggctgctctcatgccaaag
ctggagacctggtccattcattggttaatgatgacatagaaaagagggtacacgtcaaca
aagatgggagcttgtccgtggagatgaaagttcgcttccgcttgctgaatgatgagactt
tgcagtggtctacccagatcaagaagtccaacctgatgaactgtctgccttgtgaagaat
caggtgtggaggaggacagtggattagatcccatccagaaaatgaacccagaagccagct
cagaggctgatgactctttatatccctgtgatattgattcttacatgtcaaaacttgagg
aatctgaatgcgatgaggctcactgtcacagctgtggaaagaaacaccaggactatgaca
tttggaaaaaccccatgcacacaacccagagggaagagcccaacgttcgaagcacctggc
gcacaagatcatcgtgctccagcacatcttcccggaggagagtagtccacaaaaaaatga
cgtctgtggatagtctccacaccacatctagtgaggaattctctgagcacattgtgagag
agtcctcatcctactcagagactatacagaacagaatggcatatcgatccgttaaaaagt
gtacgtgccgcagtgatttgtctacaggtgcttccaatggagaagaccagcaggaacaca
ctcggacaagcacaggaaatagccagaggcattcatccttgggtgcaatgtcacattcaa
gctgtgaaaacaacctggatactcaagatgatgttgatgaccatgagatcagcaaaatca
tttcacaaaatgaagaggaaaattgtttggaagcttcatctgtgaagtgctttaaggatg
acgtggaagaggttgaaagcagcagagttgggagcgtcatgtcaaggtcatctctgcact
ccagacagagcaagaagaatgtatgtgaggaaacaagtagtgtgggtaggagcatgtcct
cctcaagccttcaaaaggcaactcaagaagataacacccggtcctccacccctgccaaca
gtgtgcacagcaagtctagtaattgtaccacaccaaaagcaaagagtgagcaggatgacc
actctgatgacaatccagttatctcctccttctccagtgagtcctgccctaagaaagagg
ctgaagaggtggaagcagagcaagaagaaaatgaagtcaatgaagtcagctcagtgtcag
caaacacaaagcctagccaatcagttaggggggagagcagtgaaggggaacgatgctcta
cacaaggaagccaccatgccagggctagtgacaggaacagcaagaaaagtgacagtgatg
agaacattccatgcaatgcctcttgctcttccagaggatccagaaagagcaaacgcagcc
acgttcatttggatacacagtctgaagtgtctgtgtcttcacttgaatccactccaaata
aaaagaagagttccctgcatgcagatgatgtgagatcaggcagcagaacatctaattatt
caaaaagctcatgtgaaaccaagaaaaaatctgttggaggccccatgtctcatcaatcag
gatctcttcactcatacatttcatctgccagtgaagcagaggcaactgcaggtcctgttg
aggagaaaagctccaaaactgcaactgaaatgaacgaccagaataataaagagattgatg
attctggcaacaaaaaaggagaggaagaggtagaagacacaggcatgcaggaggaagaga
aggatttaatgccatctgctttaccaaatacatctccagaagaagttgtgcaggaatggc
tcagtaaaatcccttcagaaacgttgcttatgaaagatgaaatgcaggatgatggggtgg
aagaatgtacagaggcaaccactgaagtatcacagtgtacaaatgctgaggaaaccccag
aggatgaaaaagttgaggaaaagaatggggaggaggctgaaaatgaagtaaaggatgaaa
tggaagaagagacagcagaagacattgtcattaatgaagaggctgaagaatgtgtcaatc
agggagaaatctctgaggttgtgtctgaagctgtcaaagctgagcaggcagaatgcaacc
agtcagttatatccagccaaaccaacaacaggagagacctgccaacctctgtccagactt
ctgtccagatcatgaaggccttgctcagttccaaacatgagaccaaatttgaccgatcaa
acagtttgcctgaagtgtcccccacgatggggaggaaactgagtaactctgccaacattt
tgattacttgtcttgccagtctccagctccttgatgaagagtcagaagatccatcagata
actcaaaagctttgagtaagtcaaggtatacagagctgctaaacctctttcaagccctgt
ggtttggatgcacagctgaaaggagtggtccaagttcaggtcaagaggcaagtgagcagg
caaagccaaccaaacctatggatcataccttcactcacatgtcctcttctggggttgatg
tttgcagtggttctggtggctcaggagaagagtgtacagctggtgccactttagtagcac
agaaaactgtggaattcaaatcagctgaacaagtggaaaatgcagacactgggactgaac
tgactgagatggctgaggctgaggctgaggctgaggctgaggctgaggctgaggagcaaa
acaaagaggaagagcagccatcccacccctcaactgcctgctcaaaggcaaaaggggagg
aaaaagcacagtctgctagagaggactctctagttcaggaggaagagaatgagaaggatc
aatgcagtaatggtgaacatggtcaggaggaagggggagaaaatgaaactgaagaaacca
gcaaattagctgaaactggagaacaagaagaagttgaaactggagaacaagaagaagctg
aaactggagaacaaaaagttgaagctgtgaatgatgaacccccacaagaaaatcctgagg
aggaagctgctcaggcagccatcactggtgttacaaatgccagtgacactgacggtggga
cagagctgaaagctgatttggaagagcaccttgaaaaagagtcaccaggtgatccagagc
ccaaagccacatccacccgtgcgggtgcaccccttgtccagcaaaactctgtggatccag
acccaacgtgggtcctgcggctgctcaagaaaatcgagaaggagttcatggctcactatg
tcaatgccatgaatgagctaaaaatcaggtggaacctgcaggacaaccagcagatggatg
aaatgatactggaactgaaggaggaagtgagtaaaaggatacaaaaaagcatagagaagg
agctgaggaagatcagaagcagagctgggaggaggatgccaagacctccagaggagccac
tcacccctgagtcaaaactccaaactgagcagaggagatggagattgcaaactatgcata
aaaagtcactctttggtgacaagaatggcaaccagaacaggctagaggacactttagact
tatccctcaatctagatacagatttagcacttagtgaagctttggaagccagtttgagca
aacaatcaagtgaggaggaatactgcccatgtgactcttgtgtgagaaaaaaactggcct
ccaagcccacaagagcccccgtggtggccaccaatgccccagtcatgaaagcatttgatt
tgcagcaaatcctgagggtgaagaaaaatgatgttgaggaaaccttggttgcagaagcag
cccaggacacccaagcacctctcaatggttctgtggaagaagcagcagaaaatggtgatg
caaatgatgagggtgaagcccaggcaaaggaaacagaaatggagagcaaggaagaaaagg
agagacaaaatg
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