Achromobacter sp. AONIH1: C2U31_06725
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Entry
C2U31_06725 CDS
T05288
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
achr
Achromobacter sp. AONIH1
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achr03000
]
C2U31_06725
Transcription factors [BR:
achr03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2U31_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
Sigma54_activ_2
AAA_5
HTH_30
AAA_2
HTH_Tnp_1
HTH_23
HTH_28
Mg_chelatase
HTH_1
HTH_29
AAA_3
Xre-like-HTH
AAA
TsaE
HTH_IclR
HTH_20
HOIP-UBA
Motif
Other DBs
NCBI-ProteinID:
AUT45703
UniProt:
A0A2I8DEC6
LinkDB
All DBs
Position
1457541..1459445
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AA seq
634 aa
AA seq
DB search
MAIQTRRQSLTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGLRPAEPLTQAEL
REARERNEALRRMSDPVMAELRKRAHGQGGLVILSDSRGLVLDCGGDLDFAQRASRIALM
PGSPWDEAAAGTNAIGTALVEGRSIVVHGAEHYFEPNRILTCAAVPVCDSQGRILGVLDL
SSQAGGIRPDALALVRAAVDQIEHRLFAQAHERDTVLRLHADPAGLGAPGEALLAFRGDL
LVGANRLALRALELSATALGVYRHEDLFEDALTHAPDATGRVQARNGAVYHARLSLPPSP
APRVVPAPERSQPRAVAPAPAAVSLDAAALDALGRSVHLMDAGVSILLQGETGAGKEVFA
RQMHARSRRAAGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQAHGGVLF
LDEIGDMPLALQSRLLRVLQEREVSPLGGARPVPVDFALLCATHRPLAHEGADAPVRPDL
YFRIAEYTVTLGPLRERTDLRELLRTLWNAQGAATALPPVVERALASYAWPGNYRQLVSV
LRTLRVLAGPSGVAGLSMLPEEIQRGGVDAARHAPRQPEEASPPSLQALADAAIREALAA
HGGNVSRAARVLGVHRSTLYRRVAALEAARAERP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagacccgtcggcagtcgctgacgcaagcgcgcctgctgttcaatcagcag
ggcgcggtgcccggcggcatggtcgccgagccgatcctgcgttcgtggcggcgctgcgcc
gacctgggtttcgacatgcgcggcctgcgccccgccgaaccgctgacccaggccgagctg
cgcgaggcccgcgagcgcaacgaggcgctgcgccgcatgtccgatcctgtcatggccgag
ctgcgcaagcgtgcgcacgggcagggcggcctggtgatcctgtccgattcgcgcggcctg
gtgctggattgcggcggcgacctggatttcgcccagcgcgcatcgcgcatcgccctgatg
cccggctctccctgggacgaggccgcggctggcaccaatgccatcggcacggcgctggtc
gagggccgttccatcgtcgtgcacggggccgagcactatttcgagcccaaccgcatcctg
acctgcgcggcggtgccggtgtgcgacagccagggacggatcctgggcgtgctggacctg
tccagccaggcgggcggcatccggcccgatgcgctggccctggtgcgtgccgccgtggac
cagatcgaacatcgcctgttcgcgcaggcgcacgagcgcgacaccgtgctgcgcctgcat
gccgatccggccgggctgggggcgccgggcgaggcgctgctggccttccggggcgacctg
ctggtcggggccaaccggctggcgctgcgggcgctggaactctcggccacggcgctgggc
gtgtatcgccatgaagacctgttcgaagacgcgctgacgcacgcgcccgatgccacgggc
cgggtgcaggcgcgcaacggcgccgtctatcacgcgcggctgagcctgccgccgtcgccc
gcgccgcgcgtcgtgccggcgcctgaacgcagtcagccccgcgccgtcgcgcccgcgcca
gccgccgtcagcctggacgcggcggcgctggacgcgctgggtcgatctgtgcacctgatg
gatgccggcgtatccattctgctgcagggcgaaaccggcgcgggcaaggaagtgttcgcg
cgccagatgcatgcgcgcagccggcgcgccgccgggccgttcgtggcggtgaactgcgcg
gcgctgcctgaaagcctgatcgaatccgaactcttcggctatgaagacggggccttcacc
ggcgcgcgccgccagggcagcaaggggctgctgcggcaggcgcatgggggcgtgctgttc
ctggacgagatcggcgacatgccgctggccttgcagtcgcgcctgttgcgcgtgctgcag
gagcgcgaggtatcgccgctgggcggggcgcggccggtgccggtggatttcgcgctgctg
tgcgccacgcatcgcccgctggcgcacgagggcgcggatgcgccggtgcggccggacctg
tatttccgcatcgccgaatacacggtgacgctggggccgctgcgcgagcggacggacctg
cgcgagctgctgcgcacgctctggaacgcgcagggcgcggcgacggcgttgccgcccgtg
gtcgagcgggcgttggccagctacgcctggccgggcaattaccggcagctggtctcggtg
ctgcgcacgttgcgcgtgctggccggcccgtcgggcgtggcgggcttgtcgatgttgccg
gaggagatccagcgcgggggcgttgatgcggcgcggcatgcgccgcgccagcccgaggag
gcgtcgccgcccagcctgcaggccttggcagacgcggccatccgcgaggcgctggccgcg
catggcggcaatgtcagccgtgcggcgcgtgtgctgggcgtgcaccgcagcacgctgtac
cggcgcgtggcggcgctggaagcggcccgggccgaacggccgtag
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