Achromobacter sp. AONIH1: C2U31_15750
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Entry
C2U31_15750 CDS
T05288
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr03030
DNA replication
achr03430
Mismatch repair
achr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U31_15750
03430 Mismatch repair
C2U31_15750
03440 Homologous recombination
C2U31_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achr03032
]
C2U31_15750
03400 DNA repair and recombination proteins [BR:
achr03400
]
C2U31_15750
Enzymes [BR:
achr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U31_15750
DNA replication proteins [BR:
achr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U31_15750
DNA repair and recombination proteins [BR:
achr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U31_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AUT47316
UniProt:
A0A2I8DIW9
LinkDB
All DBs
Position
3429503..3432994
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAATTPSPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGIKPIAGCDVWITNDDDRDKPFRLLLLVRNHQGYLNLCELLTQSFLVNQGKGRAE
IRREWLQGQEGLIALSGGRMGDVGQALDAGNAVSALALARQWALLFPGSYYIELQRAGFD
GDEAYTQAAMRLAAEAGLPVVATHPVQFLDEHEFQAHEARVCIAEGEILANPRRVRRFTK
DQYLLSSEEMHRRYADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVSLDDYLVQL
SEQGLEKRLAFLFPDEAVRESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWSLER
TLKDEPAFKERYEQEEEVRGLVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNADKRDFDVMALELDDA
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRASVDYFHSDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNHSGYRFEPVADKHTEKGKPPRT
MRYGLGAVKGTGQGAVEEILRARKEGGPFQNLFDFCRRVSKHSVNRRTIEALIKAGAFDG
IEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRRIVPMQLARLEPQRDLQWMCGVLAGVRTMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRNRLREDQLIIVQGKVSNDDYSGGMRIVADQLYDLQLARE
ARAKSLRVKLNGGADAARLRQLLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRV
RMADALFENLNAWTKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgcaacaactccgtccccctttgtccacctgcgcgtccactccgagttc
tcggtcgtcgacggcatcgtgcgcattcccgacctgatcaagcgggtcgccaagctgggc
cagccggccgtggcgctgaccgacctgtcgaacctgttcggcctgatcaagttctacaag
ggcgcgcgcggcgccgggatcaagcccatcgccggctgcgacgtctggatcaccaacgac
gacgatcgcgacaagccgttccgcctgctgttgctggtgcgcaatcaccagggctacctg
aacctgtgcgagctgttgacccagtccttcctggtcaaccagggcaagggtcgggccgag
atccggcgcgaatggctgcagggccaggaaggcctgatcgccctgtcgggcgggcgcatg
ggcgacgtgggccaggcgctggacgccggcaacgccgtgtcggcgctggcgctggcgcgc
cagtgggcgcttctatttccgggcagctactacatcgagctgcagcgcgccggtttcgac
ggcgacgaagcctacacccaggcggccatgcggctggcggccgaggccggcctgccggtg
gtggccacgcatccggtgcagttcctggacgagcacgaattccaggcccacgaggcccgc
gtctgcatcgccgaaggcgagatcctggccaatccgcgccgcgtgcgccgcttcaccaag
gatcaatacctgctcagttccgaggaaatgcaccggcgctacgccgacgtgccctcggcg
ctggccaacacggtcgagatcgccaagcgctgcaacctgagcctggtgctgggcaagccg
cgcctgcccaacttccccacgcccgatggcgtgtcgctggacgactacctggtgcagctg
tccgagcagggcctggaaaagcgcctggccttcctgttcccggacgaggccgtgcgcgag
tccaagcgcgagcagtactacgaacgcctgcgctgggagtgcaagaccatcatccagatg
ggcttcccgggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaatggc
gtgcccgtgggccccggccggggctcgggcgccggctcgctggtggcctacgcgttgggc
atcaccgacctggacccgatccgctatgacctgctgttcgagcgcttcctgaatccggag
cgggtgtccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatc
gactacgtcaaggaaaaatacgggcgcgcggccgtgagccagatcgccaccttcggcacg
ctgggcgccaaggccgtggtgcgcgacgccggccgggtgctggacatgccctatatgttc
tgcgacggcctgtccaagctgatcccgttcaacccgatggatccttggtcgctggagcgc
acgctcaaggacgagccggccttcaaggaacgctacgagcaggaagaggaagtgcgcgga
ctggtggacctggccaagccgctcgagggcctgacccgcaacatcggcatgcacgccggc
ggcgtgctgatcgcgcccggcaagctgaccgacttctgcccgctgtattgccagcccggc
caggaaaacagcgcggtctcgcagttcgacaaggacgacgtcgaggccgccggcctggtg
aagttcgacttcctgggcctgcgcaacctgaccattctggactgggccgtgcgctacgtg
cgccagttcaacgcggacaagcgcgacttcgacgtgatggcgctggagctggacgacgcg
gcggcttacaagatcctgtgcgacgccaacaccacggcggtgttccagctggaatcgcgc
ggcatgaaggagctgctcaagaagctgcggcccaacaccttcgaagatatcatcgccatg
ctggccctgtaccgtccggggccgctggaatcgggcatggtggacgatttcgtcaaccgc
aagcacggccgcgcctcggtggactacttccactccgacttggagagcaccctcaagagc
acctatggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggtggc
tactcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgagctgttcgagcagggcgccaaggaaaagggccatgacccggac
ctggcggtcaagctgttcgacctgatggagaagttcgcgggctacggcttcaacaagtcg
cactcggccgcctacgcgctgatctcgtaccagaccgcctggctcaaggcgtatcacccg
accgagttcctggccgccaccatgtcttccgacatggacgacaccgacaaggtgcagatt
ttctgccgcgacgcccaggacaacggcgtcgaggtgctgccgccggacgtgaaccactcg
ggctaccgcttcgagccggtggccgacaagcacaccgagaagggcaagccgccgcgcacc
atgcgctacggcctgggcgcggtcaagggcacggggcagggcgcggtcgaggaaatcctg
cgggcgcgcaaggaaggcggcccgttccagaacctgttcgacttctgccgccgtgtcagc
aagcattcggtcaaccggcgcaccatcgaggcgctgatcaaggcgggcgccttcgatggc
atcgagcccaaccgcgccgccatgctggcctcggtgcccacggccatggaagcggccgag
caggccgcgcgcagcgccaaccaggcttcgctgttcggcgacgacagcggcgacgtggtg
gccggcgagctggccaaggtcgcgccctgggacctgcacaagaagctcaccgaggaaaaa
tcggcgctgggctactactacagcggccacctgttcgacgcctggcgcgacgaagtgcgc
cgcatcgtgcccatgcagctggcgcgcctggagccgcagcgcgacctgcaatggatgtgc
ggcgtgctggccggcgtgcgcaccatgatgacgcgccggggcaagatggtgttcgccgtg
ctggacgacggcaccgcccaagtcgagatctcggtgttcaacgaactctacgaaaagcac
cgcaaccggctgcgcgaggaccagctcatcatcgtgcagggcaaagtcagcaacgacgat
tattccggcggcatgcgcatcgtggccgaccagttgtatgacctgcagctggcgcgcgag
gcgcgcgccaagtcgctgcgcgtcaagctcaacggcggcgccgacgccgcgcggctgcgg
cagctgctcaatccgttccgcgccgagcccgagaacggcatccccggggtgccggtcgat
atcgtctacaccaagaacaatttcctgtgcacggtccggctgggcgaggaatggcgcgtg
cgcatggccgacgcgctgttcgagaacctgaacgcctggaccaagcccgacggcgtcgag
gtcacctactga
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