KEGG   Acidovorax sp. NA2: CBP33_11455Help
Entry
CBP33_11455       CDS       T04914                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
acid  Acidovorax sp. NA2
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:acid00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    CBP33_11455
   03410 Base excision repair
    CBP33_11455
   03420 Nucleotide excision repair
    CBP33_11455
   03430 Mismatch repair
    CBP33_11455
Enzymes [BR:acid01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CBP33_11455
    6.5.1.6  DNA ligase (ATP or NAD+)
     CBP33_11455
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CBP33_11455
DNA replication proteins [BR:acid03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CBP33_11455
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CBP33_11455
DNA repair and recombination proteins [BR:acid03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CBP33_11455
   NER (nucleotide excision repair)
    Other NER factors
     CBP33_11455
   MMR (mismatch exicision repair)
    Other MMR factors
     CBP33_11455
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
2449938..2450789
Genome map
AA seq 283 aa AA seqDB search
MHRRSCLALLALAALPALPALAADAPALLLAQVYRPSLPLQDYWVSEKYDGVRGFWDGRT
LRTRGGETVAAPAWFTAGWPEVPMDGELWAGRGRFSHAQSTARLQQPDDAAWRQMRFMVF
DLPGDKGTFDQRLPALNTLVEELRQPWVQAVPQQRVANDAALQALLHRTVRAGGEGLMLH
RGASMYRAGRSDDLIKVKTHEDTEARVVAHLPGKGRHAGRMGALLLEMPSGQRFRLGAGF
SDADRERPPPVGSWVTYRFRGTHDGGLPRFASFVRVREEMLAR
NT seq 852 nt NT seq  +upstreamnt  +downstreamnt
atgcaccgcagaagctgcctcgcgttactggcgctcgccgcccttcctgccctgccagcg
ctggccgcagacgcgccggccctgctgctggcgcaggtctaccgacccagcctgccgctg
caggattactgggtcagcgaaaaatacgatggcgtgcgtggcttctgggacggccgcacg
ctgcgcacccggggcggcgaaaccgtggcggcgcccgcctggtttaccgccggctggccc
gaggtgccgatggacggagagctgtgggccgggcgcgggcgtttcagccacgcccagtcc
accgcgcgactacagcagcccgacgacgcggcctggcgccagatgcgcttcatggtgttt
gacctgcccggcgacaaaggcacgttcgaccaacgcctgcccgccctgaacacccttgtc
gaagagctgcgccagccctgggtgcaggccgtgccgcaacagcgcgtggccaatgatgcg
gcgctgcaggcgctgctgcaccgcacggtgcgcgccggcggcgaagggttgatgctgcac
cggggcgcatcgatgtaccgcgccgggcgcagcgacgatctcatcaaggtcaagacacac
gaggacaccgaggcccgcgtggtcgcccacctgcccggcaagggccgccatgcgggacgc
atgggcgcgctgcttttggagatgccctcgggccagcgtttccggctgggcgcgggcttc
agcgatgccgaccgcgaacgcccgccgcccgtgggcagctgggtgacctaccgctttcgc
ggcacccacgacggcggcctgccgcgcttcgccagttttgtgcgggtgcgcgaggagatg
ctggcaaggtga

DBGET integrated database retrieval system